| Gene: Becn1 | ID: uc007lok.1_intron_4_0_chr11_101155462_r.3p | SPECIES: mm9 |
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(3) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TTAAAATATGAGCACCTGGAATTTGAGACATTTTTATACTTTGTACTCAGAACATTCCTCTGAGAGGAATCAATGGCAAACGTAGAGAGTTGTGTAATTAGATGTAACTATATCACTAGAGTCAATCCTTAGGAAGAATGAGGAGAGAGGTGCTGCAGCCTCCACAGTCAGCCCTTCCTGGTCCCCTTGGCTGCTCCCAGGTACCAGCGGGAGTATAGTGAGTTTAAAAGGCAGCAGCTGGAGTTGGATG .......................................................(((((...))))).((.(((.....))).))..((((((((....(((((....))))).......((..((((((.......))))))..))..))).)))))........................................................................................... .......................................................56......................................................................................................160........................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................TGAGAGGAATCAATGGCAAACGTAGAG................................................................................................................................................................... | 27 | 1 | 8.00 | 8.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGAGAGGAATCAATGGCAAACGTAGA.................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - |
| ................................................................................................................................................................................................................................TAAAAGGCAGCAGCTGGAGTTGGATGt | 27 | t | 3.00 | 2.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ............................................................TGAGAGGAATCAATGGCAAACGTAGAGA.................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......TATGAGCACCTGGAATTTGAGACATT.......................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TAGTGAGTTTAAAAGGCAGCAGCTGG......... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TAAAAGGCAGCAGCTGGAGTTGGATG | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TAGGAAGAATGAGGAGAGAGGTGCTGt.............................................................................................. | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................TGAGAGGAATCAATGGCAAACGTAG..................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GTATAGTGAGTTTAAAAGGCAGCAGCTGG......... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................TGGCAAACGTAGAGAGTTGTGTAATTAGA.................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................TAGGAAGAATGAGGAGAGAGGTGCT................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TCAATGGCAAACGTAGAGAGTTGTGTA.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TGAGAGGAATCAATGGCAAACGTAGAaa.................................................................................................................................................................. | 28 | aa | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................TACTTTGTACTCAGAACATTCCTCTG............................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................TGGCAAACGTAGAGAGTTGTGTAATTAGAT................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................................................TAGGAAGAATGAGGAGAGAGGTGCTGCAGC........................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................TGAGAGGAATCAATGGCAAACGTgtag................................................................................................................................................................... | 27 | gtag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TTAGGAAGAATGAGGAGAGAGGTGC................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TTAAAAGGCAGCAGCTGGAGTTGGATG | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .TAAAATATGAGCACCTGGAATTTGAGAC............................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................TTTATACTTTGTACTCAGAACATTCCTC.............................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................TCCACAGTCAGCCCTTCCTGGTCCCCTT.............................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........TGAGCACCTGGAATTTGAGACATTTT........................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TTAAAATATGAGCACCTGGAATTTGAGACATTTTTATACTTTGTACTCAGAACATTCCTCTGAGAGGAATCAATGGCAAACGTAGAGAGTTGTGTAATTAGATGTAACTATATCACTAGAGTCAATCCTTAGGAAGAATGAGGAGAGAGGTGCTGCAGCCTCCACAGTCAGCCCTTCCTGGTCCCCTTGGCTGCTCCCAGGTACCAGCGGGAGTATAGTGAGTTTAAAAGGCAGCAGCTGGAGTTGGATG .......................................................(((((...))))).((.(((.....))).))..((((((((....(((((....))))).......((..((((((.......))))))..))..))).)))))........................................................................................... .......................................................56......................................................................................................160........................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................TAGAGTCAATCCTTAagg....................................................................................................................... | 18 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................TAGAGTCAATCCTTAag....................................................................................................................... | 17 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |