| Gene: Becn1 | ID: uc007loj.1_intron_9_0_chr11_101160391_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.mut |
(6) TESTES |
| GACAGACAAGTGTATCTCAGGGAGTTAGAGGCCCGTCTAGTCTGTCTAATGAGTGCCAGGCTACAAAGTGAGAACAGAGAGGGAGAATTGTGGTAGGGTTGGGGCTGGTAATGAGGTGAATTCCGACTCTTCCCCATGCTTTGCTAAGCCTTCCTGCTTTGATAAGACTGTTTCTGACTCAGGATTTTCCTTGCCCTTAGCTCCATTACTTACCACAGCCCAGGCGAAACCAGGAGAGACCCAGGAGGAA .....................................................((((((.((.(((.......((((..........)))).......))))).))))))............................................................................................................................................ ..................................................51...............................................................116.................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................AGGCTACAAAGTGAGAACAGAGAGGGAGAATTGTGGTAGGGTTGGGGCTGGT............................................................................................................................................. | 52 | 1 | 40.00 | 40.00 | 40.00 | - | - | - | - | - |
| ....................................................................TGAGAACAGAGAGGGggg.................................................................................................................................................................... | 18 | ggg | 1.00 | 0.00 | - | - | - | - | 1.00 | - |
| ...............................................................................................GGGTTGGGGCTGGTAATGAGGTGA................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................................................CACAGCCCAGGCGAAACCAGGAGAG............ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................TGCTTTGATAAGACcatc.............................................................................. | 18 | catc | 1.00 | 0.00 | - | - | - | - | - | 1.00 |
| GACAGACAAGTGTATCTCAGGGAGTTAGAGGCCCGTCTAGTCTGTCTAATGAGTGCCAGGCTACAAAGTGAGAACAGAGAGGGAGAATTGTGGTAGGGTTGGGGCTGGTAATGAGGTGAATTCCGACTCTTCCCCATGCTTTGCTAAGCCTTCCTGCTTTGATAAGACTGTTTCTGACTCAGGATTTTCCTTGCCCTTAGCTCCATTACTTACCACAGCCCAGGCGAAACCAGGAGAGACCCAGGAGGAA .....................................................((((((.((.(((.......((((..........)))).......))))).))))))............................................................................................................................................ ..................................................51...............................................................116.................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ................................................AGTGCCAGGCTACAAtga........................................................................................................................................................................................ | 18 | tga | 1.00 | 0.00 | - | - | - | 1.00 | - | - |