| Gene: Tbkbp1 | ID: uc007ldt.1_intron_9_0_chr11_97010930_r | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| TTAGGAGCAGGCGACAGAGGCCTGGGATGGGAATCTTGGCGGCTGTCGAGGTACTTGGGGAAAAGGGAGGTCTGGGGAGGAGACCAAGCCGAGTAGTCTAGGCAGGTTCTGGGCTGTGCCAATGCTGGGACAGCAGCCCTCCCTCCCATCTGTCCACAGGTCTCTCCTCCCTGCCCCTGATCCTTGGTCCTGTTTATCAGTTGTCCCCCACTCCACTCATGACGTCTATCTGGTTCCATTTCCTTCTATAAGCAGTCACAGCAGGGGATAGGGCAGAAACTTGAGAGAGAAGAGAGAGAGAGAGTTAGTTGTGAGATCTGTCTCTTGGCTGAAGCTCCCCAGCTACCACAGGTTCCTCAGACCAGCATGGAAGAGTTGGGAACAAAGAGCAGGTGGTCCTCTTTACTCTGTTCCTGCACTCTCAGGAGGCCCAGGGTGGGCTGAAGCCCTTACCATGGAGTCCATGTTTGAAGAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................................................................................................................................................................TGGAAGAGTTGGGAACAAAGAGCAGG.................................................................................. | 26 | 1 | 15.00 | 15.00 | 13.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................AAGAGTTGGGAACAAAGAGCAGG.................................................................................. | 23 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGGAAGAGTTGGGAACAAAGAGCAGGT................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGGAAGAGTTGGGAACAAAGAGCA.................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................TGAGAGAGAAGAGAGAGAGAGAGagt........................................................................................................................................................................ | 26 | agt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................CAGAAACTTGAGAGAGAAGAGAGAGAGA.............................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................TGGGATGGGAATCTTGGCGGCTGTCGAt......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................CAGGGGATAGGGCAGAAACTTGA............................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| TTAGGAGCAGGCGACAGAGGCCTGGGATGGGAATCTTGGCGGCTGTCGAGGTACTTGGGGAAAAGGGAGGTCTGGGGAGGAGACCAAGCCGAGTAGTCTAGGCAGGTTCTGGGCTGTGCCAATGCTGGGACAGCAGCCCTCCCTCCCATCTGTCCACAGGTCTCTCCTCCCTGCCCCTGATCCTTGGTCCTGTTTATCAGTTGTCCCCCACTCCACTCATGACGTCTATCTGGTTCCATTTCCTTCTATAAGCAGTCACAGCAGGGGATAGGGCAGAAACTTGAGAGAGAAGAGAGAGAGAGAGTTAGTTGTGAGATCTGTCTCTTGGCTGAAGCTCCCCAGCTACCACAGGTTCCTCAGACCAGCATGGAAGAGTTGGGAACAAAGAGCAGGTGGTCCTCTTTACTCTGTTCCTGCACTCTCAGGAGGCCCAGGGTGGGCTGAAGCCCTTACCATGGAGTCCATGTTTGAAGAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................GACGTCTATCTGGTTCCATTTCCTTCTA................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................CTGATCCTTGGTCCTGac........................................................................................................................................................................................................................................................................................... | 18 | ac | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................CCTCTTTACTCTGTTCCTGCACTCTCA................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................GATAGGGCAGAAACTTGAagct............................................................................................................................................................................................... | 22 | agct | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................GATCCTTGGTCCTGTTTA....................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................CCCCAGCTACCACAGGTTCCTCA.................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TTGGGAACAAAGAGCAGagt................................................................................... | 20 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTCCTGCACTCTCAGGAGGCCCA.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TGGGAACAAAGAGCAGcagt................................................................................... | 20 | cagt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |