(7)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
GGAGGAAGTGGCGCCCGGAACCGAGCCTGGGGGTCTTGGATGCAGAGAGGGTGAGAGACCGAGGCACTGAGGACTTGGAAAGGGGTGGACGGAAGAGGCGCGTGAATGTGGGCATGCGCAGGAGCGTGGGATTCTTGGAGCCAGCTTTAGTGCCTAGAAACTACCCTGTAAGTCAGCCTGGAAGGGCTAGGACTCCAAAACAGACGCTCTTAACTTGCAGAGTTTGCTCTGTCGCCTGACTCCAAGCCAAGTGCATTGTTAGTGCACACCACGCTTTGACAACAGTGCTGTTGTCCCAGAGCGTCAGGCTTCTCAGAGTGCACACGTGGGGAGGAGAGTGCCCTGCACCCCACCGGTGGCCAAGACTGTGGAGAGGTTTGAGGGACATGAACATCTCCACTTCTTCGCAGATGGCGTCGTCGAGCCCCGATGCCCCTTGTTCCTGCGACTGTTTTGTCTC
...............................................................................................................................................................................................................................................................................................................................((.((((((((((((.......)))...))))))..))))).....((((((((((((..((((..........)))).))))))))))))..................................................
......................................................................................................................................................................................................................................................................................................................311................................................................................................410................................................
Size Perfect hit Total Norm Perfect Norm mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
.....................................................................................................................................................................................................................................................................................................................................................................GGCCAAGACTGTGGAGAGGTTT................................................................................. 22 1 14.00 14.00 3.00 4.00 - 1.00 - 1.00 1.00 - - - - - 1.00 - - - - - 1.00 - 1.00 - - - - - - - - 1.00
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGGAGAGGTTT................................................................................. 23 1 7.00 7.00 - - - 1.00 - - - 2.00 - - - - 1.00 - - - - - - - - 1.00 - - - - - 1.00 1.00 -
..................................................................................................................................................................................TGGAAGGGCTAGGACTCCAAAACAGACG.............................................................................................................................................................................................................................................................. 28 1 6.00 6.00 - - 6.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................GGCCAAGACTGTGGAGAGGTT.................................................................................. 21 1 4.00 4.00 - 1.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................................................................................................................................................................................GCTAGGACTCCAAAACAG................................................................................................................................................................................................................................................................. 18 1 4.00 4.00 4.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................TGAACATCTCCACTTCTTCGCAGATGGC............................................. 28 1 3.00 3.00 - - - - 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGGAGAGGTTTGAG.............................................................................. 26 1 3.00 3.00 - 1.00 - - - - - - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................GGCCAAGACTGTGGAGAGGTTTGAGGG............................................................................ 27 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................GGCCAAGACTGTGGAGAGGTTTt................................................................................ 23 t 2.00 14.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACTGTGGAGAGGTTT................................................................................. 21 1 2.00 2.00 - - - 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...................................................................................................................................................................................................................................TCTGTCGCCTGACTCCAAGCCAAGTGCATT........................................................................................................................................................................................................... 30 1 2.00 2.00 - - - - - - - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................TCCAAAACAGACGCTCTTAACTTGCAGA............................................................................................................................................................................................................................................... 28 1 2.00 2.00 - - - - - - - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................CAGTGCTGTTGTCCCAGAGCGTCAGGC....................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................ACAGACGCTCTTAACTTGCAGAGTTTGCTC....................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TAGGACTCCAAAACAGACGCTCTTAACTTGC.................................................................................................................................................................................................................................................. 31 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................TGCACCCCACCGGTGGCCAAGACTGT........................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................TGAGGGACATGAACATCTCCACTTCTTC...................................................... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................GAAGGGCTAGGACTCCAAAACAGACGC............................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCTGCGACTGTTTTGTCT. 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.............................................................................................................................................................................................................................................................................................TGCTGTTGTCCCAGAGCGTCAGGCTTC.................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................CTAGGACTCCAAAACAGA................................................................................................................................................................................................................................................................ 18 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................TTAACTTGCAGAGTTTGCTCTGTCGC................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................TGCGCAGGAGCGTGGGATTCTTGGAGC............................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................ACAGACGCTCTTAACTTGC.................................................................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................AAGACTGTGGAGAGGTTTGAG.............................................................................. 21 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................GGGCTAGGACTCCAAAACAGACG.............................................................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................CGAGGCACTGAGGACTTGGAAAG.......................................................................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGGAGAGGTT.................................................................................. 22 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................GGCCAAGACTGTGGAGAGGT................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGGAGA...................................................................................... 18 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................AAGGGCTAGGACTCCAAAACAGACGCTC........................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGGAGAGGT................................................................................... 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................AACAGTGCTGTTGTCCCAGAGCGTCA.......................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................TTGCTCTGTCGCCTagg............................................................................................................................................................................................................................ 17 agg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACTGTGGAGAGGTTTGAGa............................................................................. 25 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.....................................................................................................................................................................................AAGGGCTAGGACTCCAAAACAGACGC............................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................AGGACTTGGAAAGGGGTGGACGGAA.............................................................................................................................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TAGGACTCCAAAACAGACGCTCTTAAC...................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................ATGAACATCTCCACTTCTTC...................................................... 20 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TAGGACTCCAAAACAGACG.............................................................................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................TGCTGTTGTCCCAGAGCGTCAGGCTTCT................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.................................................................................................................................................................................CTGGAAGGGCTAGGACTCC........................................................................................................................................................................................................................................................................ 19 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................TGCTGTTGTCCCAGAGCGTCAGGCTT..................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TAGGACTCCAAAACAGACGCTCTTAACTT.................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................CCCTGTAAGTCAGCCTGGAAGG................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................CACACCACGCTTTGACAACAGTGCTGT......................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCGAGCCCCGggga........................... 19 ggga 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................ACGCTCTTAACTTGCAGA............................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................................................................................................TGTCGCCTGACTCCAAGCCAAGTGCAT............................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................TGGCCAAGACTGTGG......................................................................................... 15 12 0.08 0.08 - - - - - - - - - - - - - - 0.08 - - - - - - - - - - - - - - -

Antisense strand
GGAGGAAGTGGCGCCCGGAACCGAGCCTGGGGGTCTTGGATGCAGAGAGGGTGAGAGACCGAGGCACTGAGGACTTGGAAAGGGGTGGACGGAAGAGGCGCGTGAATGTGGGCATGCGCAGGAGCGTGGGATTCTTGGAGCCAGCTTTAGTGCCTAGAAACTACCCTGTAAGTCAGCCTGGAAGGGCTAGGACTCCAAAACAGACGCTCTTAACTTGCAGAGTTTGCTCTGTCGCCTGACTCCAAGCCAAGTGCATTGTTAGTGCACACCACGCTTTGACAACAGTGCTGTTGTCCCAGAGCGTCAGGCTTCTCAGAGTGCACACGTGGGGAGGAGAGTGCCCTGCACCCCACCGGTGGCCAAGACTGTGGAGAGGTTTGAGGGACATGAACATCTCCACTTCTTCGCAGATGGCGTCGTCGAGCCCCGATGCCCCTTGTTCCTGCGACTGTTTTGTCTC
...............................................................................................................................................................................................................................................................................................................................((.((((((((((((.......)))...))))))..))))).....((((((((((((..((((..........)))).))))))))))))..................................................
......................................................................................................................................................................................................................................................................................................................311................................................................................................410................................................
Size Perfect hit Total Norm Perfect Norm mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
.......................................................................................................................................................................................................................................CTGACTCCAAGCCAAGTaagg................................................................................................................................................................................................................ 21 aagg 10.00 0.00 2.00 - 1.00 - 1.00 - 5.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
........................................................................................................................................................................................................................................CTGACTCCAAGCCAAGTaag................................................................................................................................................................................................................ 20 aag 3.00 0.00 - - 1.00 - - - - - - - - - - - - - - 1.00 1.00 - - - - - - - - - - -
..................................................................................................................................................................................................CCAAAACAGACGCTCTTAACTTGCA................................................................................................................................................................................................................................................. 25 1 2.00 2.00 - - - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................CAGTGCTGTTGTCCCAGAGCGTC........................................................................................................................................................... 23 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................GCTGTTGTCCCAGAGCGTCAGGCTTCTCA................................................................................................................................................. 29 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCCTTGTTCCTGCGACTGTTTTGTC.. 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................CCCCACCGGTGGCcg.................................................................................................... 15 cg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTGTTCCTGCGACTGTTTTGTCTC 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -