| Gene: Abi3 | ID: uc007lat.1_intron_1_0_chr11_95694649_r | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(16) TESTES |
| CGAGGTCTTCTTGCCGCCCCCTCCGCTGGAGGTGTCCCAGCCCCCTCTGGGTAAGATGGGTCCTGCCTTCTCAGTATTCACTTTGAGTCTCTCTCATTCAGCCCTGTGCTCCTCAGGGACCCCAGAGAAGCAGTAGATAGACTATTTTACACTAGCCCTGTTTTTGAAGCTTCTCACTTAACGGAACCTTTATAGCTTAAGCCAGCTGCCTAGGTGTTGTCCCGTAGGATCTGTCTACCCTGTGCTGAGTCTGGCTAGAGGCATTATGAGTGATGACAGGAACTGGTTAGAGCTTGAGGATGCTGCAGGGTTGGCCCACTTTCCTTTACACGAACCCTTTTGTCTTCCTTCCCAGAAGCAGAGTTGCCCCTGCCTCCTCCCCCAGCTCTAGAGGGGGATGAACTG ...............................................................................................................................................................(((..(((......)))...)))....((((...(((((.((((((...((((((.......)).)))).(((((((((...(((((.((.....))...))))).....)))..))))))..)))))).))))).)))).......................................................................................................... ..............................................................................................................................................................159..............................................................................................................................................304................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................................CAGGAACTGGTTAGAGCTTGAGGATt....................................................................................................... | 26 | t | 9.00 | 1.00 | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................TAGAGCTTGAGGATGCTGCAGGG............................................................................................... | 23 | 1 | 9.00 | 9.00 | - | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TGAGTGATGACAGGAACTGGTTAGAGC................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................GAGTGATGACAGGAACTGGTTAGAGC................................................................................................................ | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................TATGAGTGATGACAGGAACTGGTTAGA.................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TGAGTGATGACAGGAACTGGTTAGA.................................................................................................................. | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TGACAGGAACTGGTTAGAGCTTGAGGA......................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TTATGAGTGATGACAGGAACTGGTT..................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................CAGGAACTGGTTAGAGCTTGAGGAT........................................................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................CAGGAACTGGTTAGAGCTTGAGGATGC...................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................TACCCTGTGCTGAGTCTGGCTAGAGGC............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................TAGAGCTTGAGGATGCTGCAGGGTT............................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................TGCTGCAGGGTTGGCCCACTTTCCTT............................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................TAGAGCTTGAGGATGCTGCAGGGT.............................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................TGTGCTGAGTCTGGCTAGAGGCATT............................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TGAGTGATGACAGGAACTGGTTAGAG................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TTGAAGCTTCTCACTTAACGGAACCTT....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................TATGAGTGATGACAGGAACTGGTTAG................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................AGAGTTGCCCCTGCCTCCTCCCCCAGa................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................................................................................TGAGGATGCTGCAGGGTTGGCCCACTT.................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................TGATGACAGGAACTGGTTAGAGCTTGA............................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................AGGAACTGGTTAGAGCTTGAGGATGCT..................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................TGGTTAGAGCTTGAGGATGCTGCAGG................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................TGCTGAGTCTGGCTAGAGGCATTATG......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TAGGATCTGTCTACCCTGTGCTGAGTC.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CGAGGTCTTCTTGCCGCCCCCTCCGCTGGAGGTGTCCCAGCCCCCTCTGGGTAAGATGGGTCCTGCCTTCTCAGTATTCACTTTGAGTCTCTCTCATTCAGCCCTGTGCTCCTCAGGGACCCCAGAGAAGCAGTAGATAGACTATTTTACACTAGCCCTGTTTTTGAAGCTTCTCACTTAACGGAACCTTTATAGCTTAAGCCAGCTGCCTAGGTGTTGTCCCGTAGGATCTGTCTACCCTGTGCTGAGTCTGGCTAGAGGCATTATGAGTGATGACAGGAACTGGTTAGAGCTTGAGGATGCTGCAGGGTTGGCCCACTTTCCTTTACACGAACCCTTTTGTCTTCCTTCCCAGAAGCAGAGTTGCCCCTGCCTCCTCCCCCAGCTCTAGAGGGGGATGAACTG ...............................................................................................................................................................(((..(((......)))...)))....((((...(((((.((((((...((((((.......)).)))).(((((((((...(((((.((.....))...))))).....)))..))))))..)))))).))))).)))).......................................................................................................... ..............................................................................................................................................................159..............................................................................................................................................304................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................GGGTCCTGCCTTCTCAGTATTCACTT.................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................GTCTCTCTCATTCAGCCCTGTGCTCC..................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................CCAGAGAAGCAGTAGATAGACTAcgcc..................................................................................................................................................................................................................................................................... | 27 | cgcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................TCTCTCATTCAGCCCTGTGCTCCTCA.................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................GTCTCTCTCATTCAGCCCTG........................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................GCTGCAGGGTTGGCCCACTTTCCTTTACA........................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................CTCAGTATTCACTTTGAGTCTCTCTCA..................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CCAGAGAAGCAGTAGATAGACTATTT.................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGATGGGTCCTGCCTTCTCAGTATTCA..................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGCCTTCTCAGTATTCACTTTGAGTCT........................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................TGGGTCCTGCCTTCTCAGTATTCACTTTGAGTCTC.......................................................................................................................................................................................................................................................................................................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................TCTCTCTCATTCAGCCCTGTGCTCC..................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................AGTCTCTCTCATTCA................................................................................................................................................................................................................................................................................................................. | 15 | 16 | 0.06 | 0.06 | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - |