| Gene: Ppp1r9b | ID: uc007kzr.1_intron_8_0_chr11_94866432_f | SPECIES: mm9 |
|
|
(3) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| AAGAGTCGGAGCTAGCCAGGAAGGAGGAAATGGACAAACTTCTGGACAAGGTAGCGCCCTGGGCAGCCTACAGAGTGAGCAGCATGGAAGCTGGAATCCAGTACTCACTTAATCCATGGTGTTTGGGAAGGATTGTGGTGCTGGCTGGGAGCTCAGGGTCGTAGCTTAGGGTGGGGGTAAAGTTACAGGGCCCGTGCTGAGTGGCCAGGCCTGATGCCTCCTCTCTTTGTTCTCTAGATCTCAGAACTGGAAGGAAACCTGCAGACACTGAGGAACTCCAATTCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................CCATGGTGTTTGGGAAGGATTGTGGTGCTGGCTGGGAGCTCAGGGTCGTAGC.......................................................................................................................... | 52 | 1 | 171.00 | 171.00 | 171.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................AGGAAACCTGCAGACACTGAGG.............. | 22 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................TGCAGACACTGAGGAACTCC........ | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................AGGAAACCTGCAGACACTGAG............... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................CTGGCTGGGAGCTCAGagc................................................................................................................................ | 19 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................AGAACTGGAAGGAAACCTGCAGAC..................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................AGGAAATGGACAAACTTCTGGACAA.............................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAATGGACAAACTTCTGGACAAGat........................................................................................................................................................................................................................................... | 26 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................GAGGAAATGGACAAACTTCTGGACAAGa............................................................................................................................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................GCAGACACTGAGGAACTCCAAT..... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................TGGAAGGAAACCTGCAGACACTGA................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................TCAGAACTGGAAGGAAACCTGCAGA...................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................................................................TGCAGACACTGAGGAACTCCAATTC... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................AAGGAAACCTGCAGACACTGAG............... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GGAAGGAGGAAATGGAC............................................................................................................................................................................................................................................................ | 17 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - |
| .............................ATGGACAAACTTCTGGA................................................................................................................................................................................................................................................. | 17 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 |
| AAGAGTCGGAGCTAGCCAGGAAGGAGGAAATGGACAAACTTCTGGACAAGGTAGCGCCCTGGGCAGCCTACAGAGTGAGCAGCATGGAAGCTGGAATCCAGTACTCACTTAATCCATGGTGTTTGGGAAGGATTGTGGTGCTGGCTGGGAGCTCAGGGTCGTAGCTTAGGGTGGGGGTAAAGTTACAGGGCCCGTGCTGAGTGGCCAGGCCTGATGCCTCCTCTCTTTGTTCTCTAGATCTCAGAACTGGAAGGAAACCTGCAGACACTGAGGAACTCCAATTCTAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................................................GCCTCCTCTCTTTGTTCTCTAGATCTCA............................................ | 28 | 1 | 21.00 | 21.00 | - | - | - | 2.00 | 3.00 | 4.00 | 4.00 | 1.00 | 1.00 | 1.00 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................CTCCTCTCTTTGTTCTCTAGATCTCA............................................ | 26 | 1 | 19.00 | 19.00 | - | - | 3.00 | - | 5.00 | 3.00 | - | - | 4.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................................CCTCTCTTTGTTCTCTAGATCTCAGA.......................................... | 26 | 1 | 9.00 | 9.00 | - | 5.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TCCTCTCTTTGTTCTCTAGATCTCA............................................ | 25 | 1 | 5.00 | 5.00 | - | - | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CCTCCTCTCTTTGTTCTCTAGATCTCA............................................ | 27 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TCCTCTCTTTGTTCTCTAGATCTCAGA.......................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GCTGGCTGGGAGCTCAGGGTCGTAGCTTA....................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................GCGCCCTGGGCAGCCTACAGAGTGAGCA.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CTCCTCTCTTTGTTCTCTAGATCTCAGAA......................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................AAATGGACAAACTTCTGGACAAGGTA.......................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................CCTGGGCAGCCTACAGAGTGAGCAGCA........................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................GCTGGAATCCAGTACTCACTTAATCCA........................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................TGGCTGGGAGCTCAGGGTCGTAGCTTA....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TTTGTTCTCTAGATCTCAGAACTGGAA................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................GATGCCTCCTCTCTTTGTTCTCTA................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GGCCTGATGCCTCCTCTCTTTGTTCTC..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |