(2)
OTHER.mut
(1)
OVARY
(3)
PIWI.ip
(3)
PIWI.mut
(15)
TESTES

Sense strand
GATGAGCCCACCTTCTCTTTCTTCAGTGGCCCCTACATGGTCATGACTAAGTGAGTTGGAACTGGATGGCGGGAGTTAATCCTGTGGGAAGGGTGGCTTACTCTGTATTGGTAGCTTCTTCTCAAGCATGAAGGAACTCGGAGTGTCTTTAAACTAGCCTTTCTTACTGTGGACATTTTTGGCCAGATGATTTCTTGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTGAGACAGGATTTCTC
...................................................((((((....((..(((.(((((.....)))))((((((((..(((.((((.......)))))))))))))))..)))..)).))))))..............................................................................................................
..................................................51...................................................................................................152................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
..................................................GTGAGTTGGAACTGGATGGCGGGAG............................................................................................................................................................................... 25 1 17.00 17.00 3.00 1.00 1.00 3.00 4.00 1.00 - 1.00 1.00 - 1.00 - - 1.00 - -
..................................................GTGAGTTGGAACTGGATGGCGGGAGT.............................................................................................................................................................................. 26 1 8.00 8.00 2.00 - - 2.00 - 1.00 3.00 - - - - - - - - -
..................................................GTGAGTTGGAACTGGATGGCGGGA................................................................................................................................................................................ 24 1 7.00 7.00 2.00 - 3.00 - - 1.00 - - - - - 1.00 - - - -
.........................................................................................................................TCAAGCATGAAGGAACTCGGAGTGTCT...................................................................................................... 27 1 3.00 3.00 - 2.00 - 1.00 - - - - - - - - - - - -
..................................................GTGAGTTGGAACTGGATGGCGGG................................................................................................................................................................................. 23 1 3.00 3.00 1.00 - 2.00 - - - - - - - - - - - - -
....................................................................................................................................................................TACTGTGGACATTTTTGGCCAGATGAT........................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00
...................................................TGAGTTGGAACTGGATGGCGGGAGT.............................................................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - -
..TGAGCCCACCTTCTCTTTCTTCAGTGG............................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 -
.........................................................................................................................TCAAGCATGAAGGAACTCGGAGT.......................................................................................................... 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - -
..................................................GTGAGTTGGAACTGGATGGCGGGAat.............................................................................................................................................................................. 26 at 1.00 7.00 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................TACTGTGGACATTTTTGGCCAGA............................................................... 23 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - -
....................................................................................................................TCTTCTCAAGCATGAAGGAACTCGGA............................................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - -
......................................................................................................................TTCTCAAGCATGAAGGAACTCGGAGTGT........................................................................................................ 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - -
..................................................GTGAGTTGGAACTGGATGGCGGGAGTT............................................................................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - -
................................................................................................................................................................TTCTTACTGTGGACATTTTTGGCCA................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - -
..TGAGCCCACCTTCTCTTTCTTCAGTGGC............................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - -

Antisense strand
GATGAGCCCACCTTCTCTTTCTTCAGTGGCCCCTACATGGTCATGACTAAGTGAGTTGGAACTGGATGGCGGGAGTTAATCCTGTGGGAAGGGTGGCTTACTCTGTATTGGTAGCTTCTTCTCAAGCATGAAGGAACTCGGAGTGTCTTTAAACTAGCCTTTCTTACTGTGGACATTTTTGGCCAGATGATTTCTTGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTGAGACAGGATTTCTC
...................................................((((((....((..(((.(((((.....)))))((((((((..(((.((((.......)))))))))))))))..)))..)).))))))..............................................................................................................
..................................................51...................................................................................................152................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)