| Gene: Rad51c | ID: uc007ktp.1_intron_7_0_chr11_87216359_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(19) TESTES |
| TTTAAAAAAGAGAGAGAGAGAAAAGGAAAGAAAAAGGTTTCTCAGTGTAGTCCTGACTGTCCTGGAACTCGATCTGTAGACCATGCTGGCCTGCCTGATTTCCTAGTGCTGGCATTAAAGGCATGGGCCCCCATGCCAGGCTCTGAGTTATACTTTTAATTCTCTAATGTCAGGTTTTCTTTTTCTTATTTTATTTATAGAAGTTGGGATATCTAAAGAGGAAGCCTTGGAAACTCTACAAATTCTAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................TGGAACTCGATCTGTAGACCATGCTGGC................................................................................................................................................................ | 28 | 1 | 10.00 | 10.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................CTGGAACTCGATCTGTAGACCATGCga.................................................................................................................................................................. | 27 | ga | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TCGATCTGTAGACCATGCTGGCCTGC............................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGGAACTCGATCTGTAGACCATGCTGG................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TTTATTTATAGAAGTTGGGATATCTAAA................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................GGAACTCGATCTGTAGACCATGCTGGC................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................................TAGAAGTTGGGATATCTAAAGAGGAAG.......................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................................................................TATTTTATTTATAGAAGTTGGGATAT...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................TGGAACTCGATCTGTAGACCATGCTG.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................TGGAACTCGATCTGTtggt......................................................................................................................................................................... | 19 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGTAGTCCTGACTGTCCTGGAAaa..................................................................................................................................................................................... | 24 | aa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TCTGTAGACCATGCTGGCCTGCCTGATT...................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................GGTTTCTCAGTGTAGTCCTGACTGTCCTGGA........................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TCGATCTGTAGACCATGCTGGCCTGCC........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GAAGTTGGGATATCTAAAGAGGAAGCCT....................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GTTGGGATATCTAAAGAGGAAGCCT....................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TCGATCTGTAGACCATGCTGGCCTGCCTG......................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGATTTCCTAGTGCTGGCATTAAAGGC................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TGGAACTCGATCTGTAGACCATG..................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGACTGTCCTGGAACTCGATCT............................................................................................................................................................................... | 22 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - |
| TTTAAAAAAGAGAGAGAGAGAAAAGGAAAGAAAAAGGTTTCTCAGTGTAGTCCTGACTGTCCTGGAACTCGATCTGTAGACCATGCTGGCCTGCCTGATTTCCTAGTGCTGGCATTAAAGGCATGGGCCCCCATGCCAGGCTCTGAGTTATACTTTTAATTCTCTAATGTCAGGTTTTCTTTTTCTTATTTTATTTATAGAAGTTGGGATATCTAAAGAGGAAGCCTTGGAAACTCTACAAATTCTAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................GTCCTGGAACTCGATCTGTAgt............................................................................................................................................................................ | 22 | gt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GGCTCTGAGTTATACatta................................................................................................. | 19 | atta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TCGATCTGTAGACCcgtg........................................................................................................................................................................ | 18 | cgtg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................GGCATTAAAGGCATGggga............................................................................................................................. | 19 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................CTGGAACTCGATCTGTAaat............................................................................................................................................................................ | 20 | aat | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................CTGTCCTGGAACTCGATCTGTAGACga......................................................................................................................................................................... | 27 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................ACTGTCCTGGAACTCGATacaa................................................................................................................................................................................. | 22 | acaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |