| Gene: Tbx2 | ID: uc007ksb.1_intron_4_0_chr11_85650892_f | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GCCCTCCCCCAGCGCAGCGCCCAGCCCTCTGCGCCTACACCGGGCCCGAGGTGAGCGGCATAGTTGATCCGAGTCTGGAGGGAAGGACCAAGGAAGTGTCCCCTTAGGGTGCACCATAAAGTCGGTCTTTTGCTCAGTGATCGGCTAATCTCAAAGTCCTGGATAAAAGTTACCGGAATGTGGCTAGGACTTCCAATCTGGTACTCCCATATAAGGACTGTCCCTGGCAGCCAGGACATTTGGTAGAATTTTGAGCTGGACCCCTTGTGGGATATGTGGTCGGAAATAAGCTTTCTCCTCCAGGGCTCATTTTCTTCCAGTGTAAGAATGGGGTCTTGATTTATGTGACCTGCAGCTGCCCCTAGAAGCTCTCTCAACTTGACCTTCCTAACAGCTGGTCTGTCTGAAGTGTCGGTGACCAGGTCCAGGTTCCCGGGGACTGGGCGCCACGTCTGTCTCCGGCGGCGTCCGGATAACCCGTGCTCCCTCCCTCTCTCCCCGTAGCCGAGGAGAAGCCGGGCGCAGCCGACAGCGATCCTGAGCCGGAGCGGACG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................................................GGACCCCTTGTGGGATATGTGGTCGGAAATAAGCTTTCTCCTCCAGGGCTCA..................................................................................................................................................................................................................................................... | 52 | 1 | 17.00 | 17.00 | 17.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCGGCGTCCGGtgag.............................................................................. | 19 | tgag | 13.00 | 2.00 | - | 8.00 | - | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCGGCGTCCGGtg................................................................................ | 17 | tg | 7.00 | 2.00 | - | - | 3.00 | - | - | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCGGCGTCCGGtga............................................................................... | 18 | tga | 3.00 | 2.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGCGGCGTCCGG.................................................................................. | 15 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................AGCCAGGACATTTGGTAGAATTTTGAGCTGG....................................................................................................................................................................................................................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GACCTGCAGCTGCCCCTAGAAGCTCTCT.................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................TACACCGGGCCCGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGTCTGTCTCCGGCGGC........................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGATCCTGAGCCGGAGCGGACG | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................TGTGACCTGCAGCTGga.................................................................................................................................................................................................. | 17 | ga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGCGGCATAGTTGATCCGAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGACAGCGATCCTGAGCCGG........ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................TGTGGTCGGAAATAAGC....................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGGGACTGGGCGCCACG....................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGGCGGCGTCCagtt................................................................................ | 18 | agtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................................................................................................GCTGGACCCCTTGTGGGATATGTGGTCGGA.............................................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACTGGGCGCat......................................................................................................... | 15 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................GTGGGATATGTGGcgta............................................................................................................................................................................................................................................................................... | 17 | cgta | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................GTCTGGAGGGAAGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - |
| GCCCTCCCCCAGCGCAGCGCCCAGCCCTCTGCGCCTACACCGGGCCCGAGGTGAGCGGCATAGTTGATCCGAGTCTGGAGGGAAGGACCAAGGAAGTGTCCCCTTAGGGTGCACCATAAAGTCGGTCTTTTGCTCAGTGATCGGCTAATCTCAAAGTCCTGGATAAAAGTTACCGGAATGTGGCTAGGACTTCCAATCTGGTACTCCCATATAAGGACTGTCCCTGGCAGCCAGGACATTTGGTAGAATTTTGAGCTGGACCCCTTGTGGGATATGTGGTCGGAAATAAGCTTTCTCCTCCAGGGCTCATTTTCTTCCAGTGTAAGAATGGGGTCTTGATTTATGTGACCTGCAGCTGCCCCTAGAAGCTCTCTCAACTTGACCTTCCTAACAGCTGGTCTGTCTGAAGTGTCGGTGACCAGGTCCAGGTTCCCGGGGACTGGGCGCCACGTCTGTCTCCGGCGGCGTCCGGATAACCCGTGCTCCCTCCCTCTCTCCCCGTAGCCGAGGAGAAGCCGGGCGCAGCCGACAGCGATCCTGAGCCGGAGCGGACG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CCTCCCCCAGCGCAcggg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | cggg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTTTGCTCAGTGATCGGCTAATCTCA................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGCCACGTCTGcgct................................................................................................... | 18 | cgct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |