| Gene: Slfn4 | ID: uc007koj.1_intron_1_0_chr11_82989147_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.mut |
(15) TESTES |
| TCTTTCAAAAACACCGGCTGCTGAGGACTGGAAGACTCTGAAGGCTTGGGGTGAGAGAAAATGGCTTCCCACTTTGAGATGGAGGAGGGAGGGCTTAAAGTTGCTGGGGGAGAGAGCCCATGATGCTTGTTCTGAGGCTGACTAGTGATGTAGGAAGAGGCAGATCTGGCGTGGTATGTTTGGCAGGCTTGTGTGAATCTCTAGAGTCCCTTGCGGGTTCCCTATCCTCTTAGAGACCTGACCCTGTTGAACACTGAGAAAATATGGCTCCGGAAAGGACACA ...................................................................................................................(((.....(((((.((((...((...........)).)))).))))).....)))................................................................................................................. .............................................................................................................110............................................................173............................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGGCTG............................................................................................................................................... | 26 | 1 | 36.00 | 36.00 | 11.00 | 11.00 | - | 1.00 | 4.00 | 3.00 | 2.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGG.................................................................................................................................................. | 23 | 1 | 9.00 | 9.00 | 3.00 | 1.00 | - | 1.00 | - | - | - | 3.00 | - | 1.00 | - | - | - | - | - |
| .................................................................................................................GAGCCCATGATGCTTGTTCTGAGGCTG............................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGGCTGACTAGTG........................................................................................................................................ | 33 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGGAAGACTCTGAAGtga............................................................................................................................................................................................................................................. | 18 | tga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGcgg.................................................................................................................................................. | 23 | cgg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TGTTGAACACTGAGAAAATATGGCTCC............ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................ATGTTTGGCAGGCTTGTGTGAA...................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................TAGTGATGTAGGAAGAGGCAGATCTGG.................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGGC................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TGTTGAACACTGAGAAAATATGGCTC............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................GAGCCCATGATGCTTGTTCTGAGGCTGg.............................................................................................................................................. | 28 | g | 1.00 | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGGatg............................................................................................................................................... | 26 | atg | 1.00 | 9.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................AGCCCATGATGCTTGTTCTGAGGCT................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| TCTTTCAAAAACACCGGCTGCTGAGGACTGGAAGACTCTGAAGGCTTGGGGTGAGAGAAAATGGCTTCCCACTTTGAGATGGAGGAGGGAGGGCTTAAAGTTGCTGGGGGAGAGAGCCCATGATGCTTGTTCTGAGGCTGACTAGTGATGTAGGAAGAGGCAGATCTGGCGTGGTATGTTTGGCAGGCTTGTGTGAATCTCTAGAGTCCCTTGCGGGTTCCCTATCCTCTTAGAGACCTGACCCTGTTGAACACTGAGAAAATATGGCTCCGGAAAGGACACA ...................................................................................................................(((.....(((((.((((...((...........)).)))).))))).....)))................................................................................................................. .............................................................................................................110............................................................173............................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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| ......................................................................................................................CATGATGCTTGTTCTGAGGCTGACTA........................................................................................................................................... | 26 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - |