| Gene: Crlf3 | ID: uc007kld.1_intron_6_0_chr11_79877902_r.5p | SPECIES: mm9 |
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(7) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(23) TESTES |
| GGCGGGAGCTGGGCCAGCGGCTGCAGGGGCTGCGGGAGGCGCAGAGGCAGGTCGGAGGGCCGCTGCGGGCCTTAGAGGGCGCGGGCCGGAGGGTGGGCGCGCGCGGCGGGGGCGCCCCGAGGCTCAGCAGAGGAAGTGGGTCGCAGACCTGTGGGAGACGTGACATGGGGAGGTGGGTCCTGCAGAGTTCTTCAAGGGAAAGATAAGTTTGGCGGACTGAGAAAGAGTTTGGGGAGCGCTCCTGAGCCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTCGGAGGGCCGCTGCGG...................................................................................................................................................................................... | 18 | 1 | 15.00 | 15.00 | - | 13.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GAGGGCCGCTGCGGtgag.................................................................................................................................................................................. | 18 | tgag | 14.00 | 0.00 | - | - | 8.00 | 1.00 | - | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................GGAGGGCCGCTGCGG...................................................................................................................................................................................... | 15 | 2 | 7.50 | 7.50 | 6.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGtgag.................................................................................................................................................................................. | 19 | tgag | 6.00 | 7.50 | - | - | 1.50 | - | - | - | 1.00 | - | 2.00 | - | - | - | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGtga................................................................................................................................................................................... | 18 | tga | 6.00 | 7.50 | 4.00 | - | - | - | - | 1.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGC........................................................................................................................................................................................ | 16 | 1 | 5.00 | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGCGGtg.................................................................................................................................................................................... | 20 | tg | 4.00 | 15.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGCGGtga................................................................................................................................................................................... | 21 | tga | 3.00 | 15.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGt..................................................................................................................................................................................... | 16 | t | 2.50 | 7.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ......................................................GAGGGCCGCTGCGGt..................................................................................................................................................................................... | 15 | t | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................GAGGGCCGCTGCGGtga................................................................................................................................................................................... | 17 | tga | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGttga................................................................................................................................................................................... | 18 | ttga | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGtg.................................................................................................................................................................................... | 17 | tg | 2.00 | 7.50 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TTCAAGGGAAAGATAAGTTTGGCGGAC................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................AGGGGCTGCGGGAGGCcgc............................................................................................................................................................................................................... | 19 | cgc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGGgag.................................................................................................................................................................................. | 19 | gag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GAGGGCCGCTGCGGtgac.................................................................................................................................................................................. | 18 | tgac | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CGCGCGGCGGGGGCt........................................................................................................................................ | 15 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTTTGGCGGACTGAGAAAGAG....................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GCAGACCTGTGGGAGACGTGACATG................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGCGGtgag.................................................................................................................................................................................. | 22 | tgag | 1.00 | 15.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................GGCCGCTGCGGGCCTTAGAGGGCG......................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................................................................................................TGAGAAAGAGTTTGGGGAGCGCTCCT....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................AGACCTGTGGGAGACGTGACATGGGG................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................AGGGAAAGATAAGTTTGGCGGAatg............................... | 25 | atg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TCAAGGGAAAGATAAGTTTGGCGGAC................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGCGGACTGAGAAAGAG....................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................CTGTGGGAGACGTGACATG................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGCGGG..................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GAGGGCCGCTGCGGGgag.................................................................................................................................................................................. | 18 | gag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................AGGGCCGCTGCGGGgtgc................................................................................................................................................................................. | 18 | gtgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................TGCAGGGGCTGCGGGAGGCGCAGAGt........................................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................AGGGCCGCTGCGGGgagc................................................................................................................................................................................. | 18 | gagc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGCGGACTGAGAAAGAGTTTGGGGAGC............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GCCGGAGGGTGGGCGCGC.................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTCGGAGGGCCGCTGCGGt..................................................................................................................................................................................... | 19 | t | 1.00 | 15.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GGAGGGCCGCTGCGGtgat.................................................................................................................................................................................. | 19 | tgat | 0.50 | 7.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCGGGAGCTGGGCCAGCGGCTGCAGGGGCTGCGGGAGGCGCAGAGGCAGGTCGGAGGGCCGCTGCGGGCCTTAGAGGGCGCGGGCCGGAGGGTGGGCGCGCGCGGCGGGGGCGCCCCGAGGCTCAGCAGAGGAAGTGGGTCGCAGACCTGTGGGAGACGTGACATGGGGAGGTGGGTCCTGCAGAGTTCTTCAAGGGAAAGATAAGTTTGGCGGACTGAGAAAGAGTTTGGGGAGCGCTCCTGAGCCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................GCGCGCGCGGCGGGGGCGCCCCGAGGCTCA............................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................................................................GGCGGACTGAGAAAgatc.......................... | 18 | gatc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |