| Gene: Nlk | ID: uc007kjw.1_intron_9_0_chr11_78440209_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| GTTGGGTGGTTAGACATTCTCTTCGTATGGACTCTTGTCATCTTGAACACTGAAGCCTAAACTTAACATCATTATGTGGATTTGATATTGAGTGGTTTAAGATACAAAATATTTGTCATGATCTCTGAAACATTGGAGACTAAGGTTTAGAATTGATTTCTCTTTTTCCCTTCCTTTCCCCCCAAATATTGCTTCTTTAGGTCAGTAACAGATCCAAGAGATGGAAAGAGAGTAGCACTCAAAAAGATGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................ACATCATTATGTGGATTTGATATTGAGTGGTTTAAGATACAAAATATTTGTC..................................................................................................................................... | 52 | 1 | 70.00 | 70.00 | 70.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGGAAAGAGAGTAGCACTCAAAAAGATGC | 29 | 2 | 1.50 | 1.50 | - | - | - | - | 0.50 | - | - | 0.50 | - | - | 0.50 |
| .............................................................................................................................................................................................................................TGGAAAGAGAGTAGCACTCAAAAAGAT.. | 27 | 2 | 1.00 | 1.00 | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................AGATCCAAGAGATGGAAAGAGAGTAGCACTC.......... | 31 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TAACAGATCCAAGAGATGGAAAGAGA................... | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CCAAGAGATGGAAAGAGAG.................. | 19 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TAACAGATCCAAGAGATGGAAAGAGAG.................. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ...........................................................................................................................................................................................................................GATGGAAAGAGAGTAGCACTCAAAAAG.... | 27 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCCAAGAGATGGAAAGAGAGTAGCACT........... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .............................................................................................................................................................................................................TAACAGATCCAAGAGATGGAAAGAGAGT................. | 28 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGAGATGGAAAGAGAGTAGCACTCAAAA...... | 28 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCCAAGAGATGGAAAGAGAGTAGC.............. | 24 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - |
| GTTGGGTGGTTAGACATTCTCTTCGTATGGACTCTTGTCATCTTGAACACTGAAGCCTAAACTTAACATCATTATGTGGATTTGATATTGAGTGGTTTAAGATACAAAATATTTGTCATGATCTCTGAAACATTGGAGACTAAGGTTTAGAATTGATTTCTCTTTTTCCCTTCCTTTCCCCCCAAATATTGCTTCTTTAGGTCAGTAACAGATCCAAGAGATGGAAAGAGAGTAGCACTCAAAAAGATGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................TTGAGTGGTTTAAGgggt..................................................................................................................................................... | 18 | gggt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................TATTGAGTGGTTTAAGacc..................................................................................................................................................... | 19 | acc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |