(4)
OTHER.mut
(2)
OVARY
(5)
PIWI.ip
(3)
PIWI.mut
(26)
TESTES

Sense strand
GGAAGGCTGGTTGGCTTGGCACTGATGAGCCCTTCCTCTCTGCTCTCCTTCCCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTAGGGGACACTACACAGAAAATGAGAACTGCTCACTATCCCACCCCAGCCGAATTGGACGCGTATGCTAAGAAGGTCGCAAACAACCCACTGACTATAAAAATCTTCCCCAACAGTGTGAAGGTTCCCCAGCGGAAACACGTTCGTCGTACTGTGAACGGCCTCG
..........................................................................................(((.((..........((((.....))))..........((((.....))))...............)))))........................................................................................
..........................................................................................91............................................................................169...............................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
...........................................................................................................................................................................................................................AAACACGTTCGTCGTACTGTGAACGGCC... 28 1 12.00 12.00 4.00 1.00 - 2.00 3.00 - - 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
..........................................................................................................................................TTGGACGCGTATGCTAAGAAGGTCGCA..................................................................................... 27 1 11.00 11.00 5.00 1.00 - 4.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.....GCTGGTTGGCTTGGCACTGA................................................................................................................................................................................................................................. 20 1 10.00 10.00 - - 10.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................TGGACGCGTATGCTAAGAAGGTCGC...................................................................................... 25 1 9.00 9.00 - - 9.00 - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AACACGTTCGTCGTACTGTGAACGGCC... 27 1 8.00 8.00 3.00 2.00 - 1.00 2.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AACACGTTCGTCGTACTGTGAACGGCCT.. 28 1 7.00 7.00 1.00 3.00 - 1.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................AAACACGTTCGTCGTACTGTGAACGGCCT.. 29 1 6.00 6.00 1.00 2.00 - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGCTAAGAAGGTCGCAAACAACCCACT.......................................................................... 27 1 6.00 6.00 - 2.00 - - - - - - - - 1.00 - - - 1.00 - - - - - - 1.00 - - - 1.00 - -
.............................................................................................................................................................................................................................ACACGTTCGTCGTACTGTGAACGGCCT.. 27 1 4.00 4.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................TTGGACGCGTATGCTAAGAAGGTCGCAAA................................................................................... 29 1 4.00 4.00 - - - - - 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AACACGTTCGTCGTACTGTGAACGGC.... 26 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................TGGACGCGTATGCTAAGAAGGTCGCA..................................................................................... 26 1 3.00 3.00 - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................TACACAGAAAATGAGAACTGCTCACTAT............................................................................................................................... 28 1 2.00 2.00 - - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................AAACACGTTCGTCGTACTGTGAACGGCCTC. 30 1 2.00 2.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................AAACACGTTCGTCGTACTGTGAACGGC.... 27 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.................................................................................................................................................................................................................TCCCCAGCGGAAACACGTTCGTCGTAC.............. 27 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................TTGGACGCGTATGCTAAGAAGGTCGC...................................................................................... 26 1 2.00 2.00 - - - - - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................ATTGGACGCGTATGCTAAGAAGGTCGC...................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................CCCAGCGGAAACACGTTCGTCGTACTG............ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................AGAAGGTCGCAAACAACCCACTGACTATA................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................GTATGCTAAGAAGGTCGCAAACAACCC............................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.............................................................................................................................................................................................................AGGTTCCCCAGCGGAAACACGTTCGTCGT................ 29 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................GCGGAAACACGTTCGTCGTAa.............. 21 a 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................................................AGGTTCCCCAGCGGAAAC........................... 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................TTGGACGCGTATGCTAAGAAGGTCG....................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AACACGTTCGTCGTACTGTGAACGGCat.. 28 at 1.00 3.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGCTAAGAAGGTCGCAAACAACCCA............................................................................ 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
......................................................................................................................................................................................................................................TCGTACTGTGAACGGC.... 16 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
............................................................................................................................................................................CACTGACTATAAAAATCTTCCCCAAC.................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGTGAAGGTTCCCCAGCGGAAACACGTT...................... 28 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................CGTTCGTCGTACTGTGAAC....... 19 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................TCCCACCCCAGCCGAATTGGAC.......................................................................................................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................TGGACGCGTATGCTAAGAAGGTCGCAA.................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................ACACGTTCGTCGTACTGTGAACGGCC... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................CCCCAGCGGAAACACca....................... 17 ca 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.....................................................................................................................................................TGCTAAGAAGGTCGCAAACAACCCAC........................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
........................................................................................................................................................TAAGAAGGTCGCAAACAACCCACTGACT...................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................AAGGTTCCCCAGCGGAAACACGTTCGTC.................. 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................................................................................................................CACGTTCGTCGTACTGTGAACGGCC... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................CAGCCGAATTGGACGCGTATGCTAAGA............................................................................................. 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................TACACAGAAAATGAGAACTGCTCACTATC.............................................................................................................................. 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGTGAAGGTTCCCCAGCGGAAACACGTTC..................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
....................................................................................................................................GCCGAATTGGACGCGTATGCTAAGA............................................................................................. 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................CCACCCCAGCCGAATTGGACGCGTATG................................................................................................... 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGCTAAGAAGGTCGCAAACAACCCACTG......................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.......................................................................................................................................................................................................................GCGGAAACACGTTCGTCGTACTGTGA......... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................CACGTTCGTCGTACTGTGAACGGCCTC. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................GTACTGTGAACGGCCTC. 17 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................CTACACAGAAAATGAGAACTGCTCA................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...............................................................................................TACACAGAAAATGAGAACTGCTCACTATCCC............................................................................................................................ 31 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................CACTGACTATAAAAATCTTCCCCAACAGaa................................................ 30 aa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TTCCCCAGCGGAAACACGTTCGTCGTAC.............. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................GAAACACGTTCGTCGTACTGTGAACGGCC... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GGAAGGCTGGTTGGCTTGGCACTGATGAGCCCTTCCTCTCTGCTCTCCTTCCCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTAGGGGACACTACACAGAAAATGAGAACTGCTCACTATCCCACCCCAGCCGAATTGGACGCGTATGCTAAGAAGGTCGCAAACAACCCACTGACTATAAAAATCTTCCCCAACAGTGTGAAGGTTCCCCAGCGGAAACACGTTCGTCGTACTGTGAACGGCCTCG
..........................................................................................(((.((..........((((.....))))..........((((.....))))...............)))))........................................................................................
..........................................................................................91............................................................................169...............................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
................................................................................................................................CCCAGCCGAATTGGACGCGTATGCTA................................................................................................ 26 1 2.00 2.00 - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - -
....................ACTGATGAGCCCTTCCTCTCTGCT.............................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................................................................................................................TCACTATCCCACCCCAGCCGAATTGG............................................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................TCTCCTTCCCTCTCTTTCTCTCTCTCT.................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................ACTATCCCACCCCAGCCGAATTGGA........................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................TCTGCTCTCCTTCCCTCTCTTTCT............................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................................CAGCCGAATTGGACGCGTATGCTAAGA............................................................................................. 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................CCCCAGCCGAATTGGACGCGTATGCTA................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -