| Gene: Flot2 | ID: uc007khw.1_intron_8_0_chr11_77871617_f | SPECIES: mm9 |
|
|
|
(3) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(19) TESTES |
| CCTGCAGAGGCTGAGGCCCACCGCATCCAGCAGATCGCTGAGGGCGAAAAGTGAGAGCCTGGGCCCAGGAGGCAGGCTGACCAGACCTCTGTCAGGAGAGCTCTCCACTGCCCCACTACAGCTTGGAAGCTATGCAATCCCTTTGTCCAAGTCTGATCCTTTCTACAAAGCAGATAAGCCCCCAGGCATGTTGTCTGGGAGGTTCAATAAGTTAAGAGTCCAGGGTTCCTTGGGATAGTGCTTAGCACAGGGGGCCTTGTGGTTAGACCCCTCCCACTTGGAGTTGGGAGCTAGTAGCTTGTGTTCCACAAGAGCTAGCAGGACAGAGCATCACCTTCAAATGGCTCCCATCCCTAACGGCCATCAGAACGGAGTTGGAGGGTATGCTGGGCGCTGGGCCCCAGCATCTCTTAACTGAACTGCGTGTCCTGGGCTCCCTCAGGGTGAAACAAGTCCTCTTGGCACAAGCAGAAGCTGAGAAGATTCGCAAAA ..................................................................................................................................................................................................................................(((..((((..((((...)))).((((((((((.(((....(((((((.....))))..))).((((((..((((((...)))))).)))))).............)))..)))..))))))).)))).(((..((........)).))))))................................................................................................................. .................................................................................................................................................................................................................................226.......................................................................................................................................................380.............................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................TGGGATAGTGCTTAGCACAGGGGGCCT........................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 |
| .........................TCCAGCAGATCGCTGAGGGCGAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACAAGTCCTCTTGGCACAAGCAG..................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................TCCCTAACGGCCATCAGAACGGAGTT.................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAACTGAACTGCGTGTCCTGGGC.......................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCACAAGCAGAAGCTGAGAAGATTC...... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTAACTGAACTGCGTGTCCTGGGC.......................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................AGAGCTAGCAGGACAGAGCATCACCTT........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAACTGAACTGCGTGTCCTGGGt.......................................................... | 26 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................ATCAGAACGGAGTTGGAGGGTATGC......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACAAGTCCTCTTGGCACAAGCAGA.................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TCCACAAGAGCTAGCAGGACAGAGCA.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................TAACGGCCATCAGAACGGAGTTGGAGG............................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TGAGGGCGAAAAGTGAGAGCCTGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTTCTACAAAGCAGATAAGCCCCCAGG.................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCACAAGCAGAAGCTGAGAAGATT....... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TAAGTTAAGAGTCCAGGGTTCCTTGG................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................GCAGGACAGAGCATCACCTTCAAATG..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................TAGTGCTTAGCACAGGGGGCCTTGTGGTT.................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................TAGCAGGACAGAGCATCACCTTCAAATG..................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TCCAGCAGATCGCTGAGGGCGAAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................TGGGATAGTGCTTAGCACAGGGGGt............................................................................................................................................................................................................................................. | 25 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................GACCTCTGTCAGGAGAGCTCTCCACTGC............................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................TCGCTGAGGGCGAAAAGTGAGAGCCTGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGAACTGCGTGTCCTGGGCTCCC...................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................GATCGCTGAGGGCGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TGTCTGGGAGGTTCAATAAGTTAAGAGTCC............................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..TGCAGAGGCTGAGGCCCACCGCATaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................CAAGAGCTAGCAGGACAGAGCATCA............................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................CGAAAAGTGAGAGCCTGGGCCCAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TCCAGCAGATCGCTGAGGGCGAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................GAGCTAGCAGGACAGAGCATCACCTTCA......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................TGTTCCACAAGAGCTAGCAGGACAGAGC................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTGAGAGCCTGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 15 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTGCAGAGGCTGAGGCCCACCGCATCCAGCAGATCGCTGAGGGCGAAAAGTGAGAGCCTGGGCCCAGGAGGCAGGCTGACCAGACCTCTGTCAGGAGAGCTCTCCACTGCCCCACTACAGCTTGGAAGCTATGCAATCCCTTTGTCCAAGTCTGATCCTTTCTACAAAGCAGATAAGCCCCCAGGCATGTTGTCTGGGAGGTTCAATAAGTTAAGAGTCCAGGGTTCCTTGGGATAGTGCTTAGCACAGGGGGCCTTGTGGTTAGACCCCTCCCACTTGGAGTTGGGAGCTAGTAGCTTGTGTTCCACAAGAGCTAGCAGGACAGAGCATCACCTTCAAATGGCTCCCATCCCTAACGGCCATCAGAACGGAGTTGGAGGGTATGCTGGGCGCTGGGCCCCAGCATCTCTTAACTGAACTGCGTGTCCTGGGCTCCCTCAGGGTGAAACAAGTCCTCTTGGCACAAGCAGAAGCTGAGAAGATTCGCAAAA ..................................................................................................................................................................................................................................(((..((((..((((...)))).((((((((((.(((....(((((((.....))))..))).((((((..((((((...)))))).)))))).............)))..)))..))))))).)))).(((..((........)).))))))................................................................................................................. .................................................................................................................................................................................................................................226.......................................................................................................................................................380.............................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAAACAAGTCCgtac.................................... | 18 | gtac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................AGCAGGACAGAGCATCACtgt.............................................................................................................................................................. | 21 | tgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................GCTCCCATCCCTAACGGCCATCAGA............................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |