(6)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(1)
PIWI.mut
(23)
TESTES

Sense strand
CTTCGGCAGAGGTTTTCAGGCCTGGCCCGTTGCCTGGGGCTCATGCTCAGGTGTGTGGCTATTGAAGGGAACGGGCTTGGGGCTGGAAGGTGCGGTGGGTGTGTGGAGTCAGCTAGGGTGACTGCTCTGAGGGTCTCTTTGTTCTGGTTCTCTAGCTCTGAGTTTGGGGCTCCTGTGTCCGTTCCTGTGCAGGAAATCCTGGACC
.................................................................(((((((((((..((((((...(((.(((((((.((........)).))......))))))))...))))))...))))..)))))))....................................................
............................................................61............................................................................................155................................................
Size Perfect hit Total Norm Perfect Norm mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT2()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
mjTestesWT4()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
................................................................AAGGGAACGGGCTTGG............................................................................................................................. 16 13 132.85 132.85 51.00 45.54 15.31 1.08 2.31 2.85 - 1.31 1.15 5.08 4.46 0.69 - 1.85 - 0.23 - - - - - - - -
.................................................................AGGGAACGGGCTTGG............................................................................................................................. 15 15 47.93 47.93 8.40 12.73 10.20 1.47 6.93 1.60 - 1.73 2.00 0.27 0.33 1.80 - 0.40 - 0.07 - - - - - - - -
................................................................AAGGGAACGGGCTTG.............................................................................................................................. 15 14 8.21 8.21 0.71 1.29 3.14 0.29 0.57 0.57 - 0.36 0.29 - 0.50 0.29 - - - 0.21 - - - - - - - -
...................................................................GGAACGGGCTTGGcag.......................................................................................................................... 16 cag 8.00 0.00 - - - 1.00 5.00 - - 1.00 1.00 - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGcag.......................................................................................................................... 17 cag 6.00 0.00 - - - 3.00 2.00 - - 1.00 - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcaga......................................................................................................................... 17 caga 6.00 0.00 - - - 2.00 - - 2.00 1.00 1.00 - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcaga......................................................................................................................... 19 caga 4.33 47.93 0.33 - 0.33 0.20 0.07 2.87 - - - 0.20 - - - - - 0.33 - - - - - - - -
....................................................................GAACGGGCTTGGaaga......................................................................................................................... 16 aaga 4.00 0.00 - - - - 1.00 - - 1.00 2.00 - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGcaga......................................................................................................................... 18 caga 4.00 0.00 - - - 1.00 - - 1.00 - 1.00 - - - 1.00 - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcgt.......................................................................................................................... 16 cgt 2.00 0.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGcag.......................................................................................................................... 19 cag 1.54 132.85 0.23 0.92 - 0.08 0.08 0.08 0.08 - - 0.08 - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGG............................................................................................................................ 15 2 1.50 1.50 - - 1.00 - - - - - - 0.50 - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGcaga......................................................................................................................... 20 caga 1.15 132.85 0.15 - 0.08 - - 0.85 - - - - - - - - - - - - - - - 0.08 - -
....................................................................GAACGGGCTTGGaat.......................................................................................................................... 15 aat 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcga.......................................................................................................................... 16 cga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcggc......................................................................................................................... 17 cggc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGGGgaa........................................................................................................................ 21 gaa 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGt............................................................................................................................. 15 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTtgcg........................................................................................................................... 18 tgcg 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..................................................................GGGAACGGGCTTGGGag.......................................................................................................................... 17 ag 1.00 1.50 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGaaac......................................................................................................................... 18 aaac 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGGag.......................................................................................................................... 18 ag 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................AACGGGCTTGGGaga......................................................................................................................... 15 aga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGGGCTGGAAG.................................................................................................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................GTGTGTGGCTATTGAAGGGAACGGG.................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...................................................................GGAACGGGCTTGGcggg......................................................................................................................... 17 cggg 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................TGAAGGGAACGGGCTTGGcgga......................................................................................................................... 22 cgga 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcgtt......................................................................................................................... 17 cgtt 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGGGgaat....................................................................................................................... 20 gaat 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGtat........................................................................................................................... 17 tat 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGatga......................................................................................................................... 18 atga 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.........................................................................................................................................TTTGTTCTGGTTCTCTAG.................................................. 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...............................................................GAAGGGAACGGGCTTGG............................................................................................................................. 17 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGGaaa......................................................................................................................... 20 aaa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGcggc......................................................................................................................... 18 cggc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGccg........................................................................................................................... 17 ccg 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.................................................................AGGGAACGGGCTcgg............................................................................................................................. 15 cgg 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGctga......................................................................................................................... 17 ctga 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGcgc.......................................................................................................................... 17 cgc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGGa........................................................................................................................... 18 a 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..................................................................GGGAACGGGCTTGGaaga......................................................................................................................... 18 aaga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................GTGTGTGGCTATTGAAGGGAACGGGg................................................................................................................................. 26 g 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -
............TTTTCAGGCCTGGCtgcc............................................................................................................................................................................... 18 tgcc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................................................GAAGGGAACGGGCTTGGc............................................................................................................................ 18 c 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...............................................................GAAGGGAACGGGCTTGGcg........................................................................................................................... 19 cg 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................GGAACGGGCTTGGcggt......................................................................................................................... 17 cggt 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGGc........................................................................................................................... 17 c 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................................................................GGGAACGGGCTTGGGGgtgg....................................................................................................................... 20 gtgg 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................GGGAACGGGCTTGGagga......................................................................................................................... 18 agga 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTcgc............................................................................................................................ 17 cgc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGGcga......................................................................................................................... 19 cga 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcag.......................................................................................................................... 18 cag 0.87 47.93 0.07 0.07 - 0.13 0.20 0.27 0.13 - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcgt.......................................................................................................................... 18 cgt 0.60 47.93 - - - - - - - - - - 0.53 - - 0.07 - - - - - - - - - -
..................................................................GGGAACGGGCTTGGGa........................................................................................................................... 16 a 0.50 1.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGa............................................................................................................................ 17 a 0.38 132.85 - - - - 0.08 - - 0.08 - - 0.23 - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGaag.......................................................................................................................... 19 aag 0.31 132.85 - - - - - - - 0.15 0.15 - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGagaa......................................................................................................................... 19 agaa 0.27 47.93 - - - - - - - - - - - - - - - 0.27 - - - - - - - -
.................................................................AGGGAACGGGCTTGGaag.......................................................................................................................... 18 aag 0.27 47.93 - - - - 0.07 - - - - - 0.20 - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGag........................................................................................................................... 18 ag 0.23 132.85 0.15 - 0.08 - - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGaa........................................................................................................................... 17 aa 0.20 47.93 - - - 0.07 - - 0.13 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGct........................................................................................................................... 18 ct 0.15 132.85 - 0.08 - - - - - - - - - - - - - - 0.08 - - - - - - -
................................................................AAGGGAACGGGCTTGGagga......................................................................................................................... 20 agga 0.15 132.85 - 0.08 0.08 - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGtag.......................................................................................................................... 19 tag 0.15 132.85 - - - - - 0.15 - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGaca.......................................................................................................................... 19 aca 0.15 132.85 - - - - - - - - - - - - - 0.15 - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGaaga......................................................................................................................... 19 aaga 0.13 47.93 - - - - - 0.07 - - 0.07 - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcggc......................................................................................................................... 19 cggc 0.13 47.93 - - - - - - - - - - - - - 0.07 - - - - - - - - - 0.07
.................................................................AGGGAACGGGCTTGGtaga......................................................................................................................... 19 taga 0.13 47.93 - - - - - 0.13 - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGct........................................................................................................................... 17 ct 0.13 47.93 0.13 - - - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGcggc......................................................................................................................... 20 cggc 0.08 132.85 0.08 - - - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGcggg......................................................................................................................... 20 cggg 0.08 132.85 - - - - - - 0.08 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGagg.......................................................................................................................... 19 agg 0.08 132.85 - - 0.08 - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGcata......................................................................................................................... 20 cata 0.08 132.85 - - - - - - 0.08 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGaa........................................................................................................................... 18 aa 0.08 132.85 - - - - - - 0.08 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGGaaa.......................................................................................................................... 19 aaa 0.08 132.85 - - - 0.08 - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGtcg........................................................................................................................... 18 tcg 0.07 8.21 - 0.07 - - - - - - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGccag.......................................................................................................................... 19 ccag 0.07 8.21 - - - - - - 0.07 - - - - - - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGt............................................................................................................................. 16 t 0.07 8.21 - - - - - - - - - - - 0.07 - - - - - - - - - - - -
................................................................AAGGGAACGGGCTTGa............................................................................................................................. 16 a 0.07 8.21 - - - - - 0.07 - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGagga......................................................................................................................... 19 agga 0.07 47.93 - - 0.07 - - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcaa.......................................................................................................................... 18 caa 0.07 47.93 - - - 0.07 - - - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGctg.......................................................................................................................... 18 ctg 0.07 47.93 - - - - - - - - - - - - - - - - - - - - - - 0.07 -
.................................................................AGGGAACGGGCTTGGtag.......................................................................................................................... 18 tag 0.07 47.93 - - - - - 0.07 - - - - - - - - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcggt......................................................................................................................... 19 cggt 0.07 47.93 - - - - - - - - - - - - 0.07 - - - - - - - - - - -
.................................................................AGGGAACGGGCTTGGcggg......................................................................................................................... 19 cggg 0.07 47.93 - - - - - - - - - - - - - 0.07 - - - - - - - - - -

Antisense strand
CTTCGGCAGAGGTTTTCAGGCCTGGCCCGTTGCCTGGGGCTCATGCTCAGGTGTGTGGCTATTGAAGGGAACGGGCTTGGGGCTGGAAGGTGCGGTGGGTGTGTGGAGTCAGCTAGGGTGACTGCTCTGAGGGTCTCTTTGTTCTGGTTCTCTAGCTCTGAGTTTGGGGCTCCTGTGTCCGTTCCTGTGCAGGAAATCCTGGACC
.................................................................(((((((((((..((((((...(((.(((((((.((........)).))......))))))))...))))))...))))..)))))))....................................................
............................................................61............................................................................................155................................................
Size Perfect hit Total Norm Perfect Norm mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT2()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
mjTestesWT4()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
............................................................................................GGGTGTGTGGAGTCAGCttga............................................................................................ 21 ttga 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -