| Gene: RP23-198E14.4 | ID: uc007jua.1_intron_0_0_chr11_70028215_f | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| GGACACTGCGTGGGTCAGCGCCCTGGCCTTGGCCGTGCAGCAGGCAGCCAGTGAGGGGGGCCCCCCGAGGTGGGAGGCGGGCACCGGGTGGAGAGGCCGTGGATGTAGTGATGGGAGACAGCAGACTTGATTACCAGACAACCTGAGAGTTACTGGTGGAACCAAATTCTAGAAGAGTGGGTCTTGAGGTCAATGGGAGGAGTTACCAGGCCAGGCAAAACAGCCAATGAGAAATGTTTCGGATAGTTTGGGGGTCCCGGGGCATGTCTTCGTTGACTCCGCCCCCTTCTAGGCCCAGTGGGCAGCGCCCTGAGCACTCGCTGGGGGGCACGCCCCGTGGTG .............................................................................................................................................................(((.(((((((((.((((.((...((((..((((..(((.........))))))).(((......)))...)))).)).)))))))..))))))...)))..................................................................................... ....................................................................................................................................................149.........................................................................................................257................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................TGAGAAATGTTTCGGATAGTTTGGGG......................................................................................... | 26 | 1 | 10.00 | 10.00 | 5.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TGAGAAATGTTTCGGATAGTTTGGG.......................................................................................... | 25 | 1 | 8.00 | 8.00 | 2.00 | 2.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGTGGAACCAAATTCTAGAAGAGTG................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGGGAGACAGCAGACTTGATTACCAGA............................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TGGGAGGAGTTACCAGGCCAGGCAAAAC......................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TGAGAAATGTTTCGGATAGTTTGGt.......................................................................................... | 25 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GAAATGTTTCGGATAGTTTGGGGGT....................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TACTGGTGGAACCAAATTCTAGAAGAGTGG.................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TAGAAGAGTGGGTCTTGAGGTCAAT.................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................ACCAAATTCTAGAAGAGTGGG................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TGAGAAATGTTTCGGATAGTTTGGGtgt....................................................................................... | 28 | tgt | 1.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................................TGAGAAATGTTTCGGATAGTTTGG........................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...CACTGCGTGGGTCttg................................................................................................................................................................................................................................................................................................................................... | 16 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................GTGGAACCAAATTCTAGAAGAGTGGG................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGTAGTGATGGGAGACAGCAGACaaaa.................................................................................................................................................................................................................... | 27 | aaaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGGGAGACAGCAGACTTGATTACCAGAC........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TACTGGTGGAACCAAATTCTAGAAGAGT.................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TAGAAGAGTGGGTCTTGAGGTCAATGG.................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GGTGGAACCAAATTCTAGAAGAGTGGG................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................TACTGGTGGAACCAAATTCTAGAAGAGTG................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................TGGATGTAGTGATGGGAGACAGCAGA......................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TTGACTCCGCCCCCTTCTAGGCCCAGT........................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................GTGATGGGAGACAGCAGACTTGATTACC............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................GGGAGACAGCAGACTTGATTACCAGAC........................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| GGACACTGCGTGGGTCAGCGCCCTGGCCTTGGCCGTGCAGCAGGCAGCCAGTGAGGGGGGCCCCCCGAGGTGGGAGGCGGGCACCGGGTGGAGAGGCCGTGGATGTAGTGATGGGAGACAGCAGACTTGATTACCAGACAACCTGAGAGTTACTGGTGGAACCAAATTCTAGAAGAGTGGGTCTTGAGGTCAATGGGAGGAGTTACCAGGCCAGGCAAAACAGCCAATGAGAAATGTTTCGGATAGTTTGGGGGTCCCGGGGCATGTCTTCGTTGACTCCGCCCCCTTCTAGGCCCAGTGGGCAGCGCCCTGAGCACTCGCTGGGGGGCACGCCCCGTGGTG .............................................................................................................................................................(((.(((((((((.((((.((...((((..((((..(((.........))))))).(((......)))...)))).)).)))))))..))))))...)))..................................................................................... ....................................................................................................................................................149.........................................................................................................257................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................GTGATGGGAGACAGCAGACTTGATTA................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................CAGCAGACTTGATTACCAGACAACCT...................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................GACTTGATTACCAGACAACCTGAGA.................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................GATGGGAGACAGCAGACTTGATTACCA.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................AGTTACTGGTGGAACCAAATTCTAGAA........................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |