| Gene: Plscr3 | ID: uc007jrz.1_intron_0_0_chr11_69660194_f | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| CCTGTGAGCCCCGGAGTGCGTGGCCCCCCGACTTATTCTGGGGGCTTCAGGTGAGCCGGACCATAGAGGGGTTAAGGAGACTTTCCTCGGGGTCAGGTCATCTGTCTGACCTCAGGACCATCTGCCCTGCCGTCTGCCAACAGCCATCTCCGTAGAAAAAATGGGAGAACAAAGGGAGGGGGCGGTCCTGGGGCCCCTAAGAAAATTCAGGGTCCTAGGTACCCCGCCCCGCCCGCTGACACTTTCGGTTTCTCCCCGAGTCTTAGGTGCCGCCCTAGAGACCCTGGGCCCGTACTGGGCGCAGCTACCTCTTCGC ..................................................(((..((.((((...(((((...(((....))))))))..)))).(((((......)))))...))..)))(((((((.((..(((....)))...(((((............)))))......))..)))))))................................................................................................................................... ..................................................51.....................................................................................................................................186................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGCCGGACCATAGAGGGGTTAAGGAGACTTTCCTCGGGGTCAGGTCATC...................................................................................................................................................................................................................... | 52 | 1 | 95.00 | 95.00 | 95.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGCCGGACCATAGAGGGGT.................................................................................................................................................................................................................................................... | 22 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TGGGGGCTTCAGGTGAGCCGG................................................................................................................................................................................................................................................................. | 21 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GAGAACAAAGGGAGGGGG...................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................GAAAAAATGGGAGAACAAAGGGAGGG........................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................GCTTCAGGTGAGCCGGACCA............................................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................CTTATTCTGGGGGCTTCAG.......................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................CTTCAGGTGAGCCGGACCATA........................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................CCGACTTATTCTGGGGGCT.............................................................................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................AAGGGAGGGGGCGGTCCTGGGGCCCC....................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................TGACCTCAGGACCATCTGCCCTGCCGT....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................TGAGCCGGACCATAGAGGGGTTAAGGA.............................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................GAGCCGGACCATAGAGGGGTT................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GCCGGACCATAGAGGGGTTA.................................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTGTGAGCCCCGGAGTGCGTGGCCCCCCGACTTATTCTGGGGGCTTCAGGTGAGCCGGACCATAGAGGGGTTAAGGAGACTTTCCTCGGGGTCAGGTCATCTGTCTGACCTCAGGACCATCTGCCCTGCCGTCTGCCAACAGCCATCTCCGTAGAAAAAATGGGAGAACAAAGGGAGGGGGCGGTCCTGGGGCCCCTAAGAAAATTCAGGGTCCTAGGTACCCCGCCCCGCCCGCTGACACTTTCGGTTTCTCCCCGAGTCTTAGGTGCCGCCCTAGAGACCCTGGGCCCGTACTGGGCGCAGCTACCTCTTCGC ..................................................(((..((.((((...(((((...(((....))))))))..)))).(((((......)))))...))..)))(((((((.((..(((....)))...(((((............)))))......))..)))))))................................................................................................................................... ..................................................51.....................................................................................................................................186................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................GCCGTCTGCCAACAGCCATCTCCGTAGA................................................................................................................................................................ | 28 | 1 | 7.00 | 7.00 | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGCCGTCTGCCAACAGCCATCTC...................................................................................................................................................................... | 23 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TCTCCCCGAGTCTTAGGTGCCGCCCTAt....................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................TCTCCCCGAGTCTTAGGTGCCGCCCTA....................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................CCATCTCCGTAGAAAAAA........................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................CCAACAGCCATCTCCGTAGAAAAAA........................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................GCCAACAGCCATCTCCGTAGAAAAAA........................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |