| Gene: Fxr2 | ID: uc007jqt.1_intron_5_0_chr11_69455643_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(9) TESTES |
| TTGCTGGTTTGCCTGCATGTGCATCTATGTGAGGGTGTCAGATCTCCTGGAACTGGAATTACAGACAAGTGTGAACTGCCATGTAGGTTCTGGGAATTGAACCTAGCTCCTCTGTCAGAGCAGTCAGTTCTCTTAACCTCTGAGCCACTTGTCTCTGCCCATATATTTTGCTTTTATACTTCTTGTTCATCATTCCCCAGTCAACCACAGAAGCCCCTGTGAAGAGGGCATCTTTGTTGGGTGATATGCA .....................................................................................((((..(((((((((..((.((((........)))))))))))))))..))))...(((........)))............................................................................................... .....................................................................................86...................................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................GTTCTCTTAACCTCTGAGCCACTTGTCTCTGCCCATATATTTTGCTTTTATA........................................................................ | 52 | 1 | 63.00 | 63.00 | 63.00 | - | - | - | - | - | - | - | - |
| .............................TGAGGGTGTCAGATCTCgtta........................................................................................................................................................................................................ | 21 | gtta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................TGGGAATTGAACCTAGCTCCTCTGTC...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................CTGCCATGTAGGTTCTGGGAATTGAACta.................................................................................................................................................. | 29 | ta | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................TGTGAAGAGGGCATCTTTGTTGGGTG....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| .............................TGAGGGTGTCAGATCTCCTGGAAaa.................................................................................................................................................................................................... | 25 | aa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................GCAGTCAGTTCTCTTAACCTCTGAGCCA....................................................................................................... | 28 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | 0.08 | - | - |
| TTGCTGGTTTGCCTGCATGTGCATCTATGTGAGGGTGTCAGATCTCCTGGAACTGGAATTACAGACAAGTGTGAACTGCCATGTAGGTTCTGGGAATTGAACCTAGCTCCTCTGTCAGAGCAGTCAGTTCTCTTAACCTCTGAGCCACTTGTCTCTGCCCATATATTTTGCTTTTATACTTCTTGTTCATCATTCCCCAGTCAACCACAGAAGCCCCTGTGAAGAGGGCATCTTTGTTGGGTGATATGCA .....................................................................................((((..(((((((((..((.((((........)))))))))))))))..))))...(((........)))............................................................................................... .....................................................................................86...................................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................TCAGATCTCCTGGAACTGGAAtgaa................................................................................................................................................................................................ | 25 | tgaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..............................GGTGTCAGATCTCCTGGAACTGGAata................................................................................................................................................................................................. | 27 | ata | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................GCAGTCAGTTCTCTTAACCT............................................................................................................... | 20 | 17 | 0.06 | 0.06 | - | - | - | - | - | - | - | 0.06 | - |
| ................................................................................................................TGTCAGAGCAGTCAG........................................................................................................................... | 15 | 19 | 0.05 | 0.05 | - | - | - | - | - | - | - | - | 0.05 |