| Gene: Wdr79 | ID: uc007jqj.1_intron_8_0_chr11_69392048_r | SPECIES: mm9 |
|
|
(2) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| GCCACGGAAGGTGTGTCTGAGGAACGCGCTGAAGTGGATGAGGGGGACACGTAAGTGACACTGGAATCTGAGGAGCCTGGACCTGTGAGAACGACAGCCACCGGTCCTCAGCACCATTTTATTTCCATTTTGCTCTGACGACCCACGTTTGCTGTTTCTCCATCTCCTTTCCAGCTTTTGGACCTACAGCTTCTCGCAGGTACCCCGATACCTCAGTGGTTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............TCTGAGGAACGCGCTGAAGTGGATGA....................................................................................................................................................................................... | 26 | 1 | 16.00 | 16.00 | 3.00 | 5.00 | 1.00 | 1.00 | 1.00 | - | 2.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTAAGTGACACTGGAATCTGAGGAGC.................................................................................................................................................... | 26 | 1 | 12.00 | 12.00 | - | 1.00 | 2.00 | 1.00 | - | 5.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................TGAGGAACGCGCTGAAGTGGATGAG...................................................................................................................................................................................... | 25 | 1 | 7.00 | 7.00 | 1.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 |
| ...............TCTGAGGAACGCGCTGAAGTGGATG........................................................................................................................................................................................ | 25 | 1 | 4.00 | 4.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGACACTGGAATCTGAGGAGCC................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGTCTGAGGAACGCGCTGAAGTGGAT......................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGAGGAACGCGCTGAAGTGGATGAGG..................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CTGAGGAACGCGCTGAAGTGGATGA....................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................TGAGGAACGCGCTGAAGTGGATGAGt..................................................................................................................................................................................... | 26 | t | 2.00 | 7.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CTGAGGAACGCGCTGAAGTGGATGAG...................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GAGGAACGCGCTGAAGTGGATGAGG..................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CCTACAGCTTCTCGCAGGTACCCCGAT............... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................TTTATTTCCATTTTGCTCTGACGACCCAC.............................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGACACTGGAATCTGAGGAGCCTGGAC.............................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGACACTGGAATCTGAGGAGCCTG................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TCTGAGGAACGCGCTGAAGTGGATa........................................................................................................................................................................................ | 25 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CTGAGGAACGCGCTGAAGTGGATGAGt..................................................................................................................................................................................... | 27 | t | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CGCTGAAGTGGATGAGGGGGA................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................AGTGACACTGGAATCTGAGGAGCCTGGt............................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TCTGAGGAACGCGCTGAAGTGGATGAGt..................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGAGGAACGCGCTGAAGTGGATGA....................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TCTGAGGAACGCGCTGAAGTGGATGAt...................................................................................................................................................................................... | 27 | t | 1.00 | 16.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGTCTGAGGAACGCGCTGAAGTGGATG........................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGTGAGAACGACAGCCACCGGTCCTC................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................AGGAACGCGCTGAAGTGGATGAGG..................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .CCACGGAAGGTGTGTCTGAGGAACGC..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................AATCTGAGGAGCCTGGACCTGTGAGA...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AAGTGACACTGGAATCTGAGGAGCCTG................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................TAAGTGACACTGGAATCTGAGGAG..................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTGACACTGGAATCTGAG........................................................................................................................................................ | 18 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................TGAGGAACGCGCTGAAGT............................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................GGAACGCGCTGAAGTGGATGAGGGG................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGAGGAACGCGCTGAAGTGGATGAGta.................................................................................................................................................................................... | 27 | ta | 1.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCACGGAAGGTGTGTCTGAGGAACGCGCTGAAGTGGATGAGGGGGACACGTAAGTGACACTGGAATCTGAGGAGCCTGGACCTGTGAGAACGACAGCCACCGGTCCTCAGCACCATTTTATTTCCATTTTGCTCTGACGACCCACGTTTGCTGTTTCTCCATCTCCTTTCCAGCTTTTGGACCTACAGCTTCTCGCAGGTACCCCGATACCTCAGTGGTTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................GTTTGCTGTTTCTCCATCTCCTTTCCA................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ACGTTTGCTGTTTCTCCATCTCCTTTCCA................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................GCCACCGGTCCTCAGCACCATTTTA....................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |