| Gene: Dnahc2 | ID: uc007jqg.1_intron_50_0_chr11_69289149_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(15) TESTES |
| CAACCTGTTAGCTGTCTTGTCTGATGGAAAGTTCTGGCCAAAAGTCATGACACTGTCGCTCAGGTCCCCCATGCACCCCCTATTTCGGGTGCCACCTTTGCTACTAAAGCATTTTCGGGAAGGGTGTGTTGGGCTGTGGTCTAGTGGCCTGGGACACCTCTCTTGCTGTAGTGACGCTGCCTCTCTCTCCCGCTCCACAGAGTGGAGCCTGGGGCTGCTTTGACGAGTTTAACCGCATCAACATTGAGGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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| ..............................................................................................................ATTTTCGGGAAGGGTGTGTTGGGCTGTGGTCTAGTGGCCTGGGACACCTCTC........................................................................................ | 52 | 1 | 49.00 | 49.00 | 49.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGTGGTCTAGTGGCtag................................................................................................... | 17 | tag | 4.00 | 0.00 | - | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TTGCTGTAGTGACGCTGCCTCTCTC............................................................... | 25 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CTGTGGTCTAGTGGttag................................................................................................... | 18 | ttag | 3.00 | 0.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................TATTTCGGGTGCCACCTTTGCTACTA................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................GTGGAGCCTGGGGCTta................................ | 17 | ta | 2.00 | 0.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGTGGTCTAGTGGCta.................................................................................................... | 16 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................................................................CTGGGGCTGCTTTGACGAGTTTAAC................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCGGGAAGGGTGTGTTGGGCTGTGGTC............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCTTGCTGTAGTGACGCTGCCTCTC................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................TCTGATGGAAAGTTCTGGCCAAAAGTC............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................TCATGACACTGTCGCTCAGGTCCCCCA................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................TGGGACACCTCTCTTGCTGTAGTGACGC......................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCTTGCTGTAGTGACGCTGCCTCTCT................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................CACTGTCGCTCAGGTCCCCCATGCt............................................................................................................................................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................GAGTGGAGCCTGGGGg................................... | 16 | g | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....TGTTAGCTGTCTTGTCTGATGGAAA............................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCTCTTGCTGTAGTGACGCTGC...................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TTTCGGGTGCCACCTTTGCTACTAAAGCATT......................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................TGACACTGTCGCTCAGGTCCCCCATGC................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GGGGCTGCTTTGACGAGTTTAACCGCAT............ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................TGCTACTAAAGCATTTTCGGGAAGGG.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................TGGGACACCTCTCTTGCTGTAGTGACG.......................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GAGTGGAGCCTGGGGC................................... | 16 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................CTGTGGTCTAGTGGC...................................................................................................... | 15 | 7 | 0.14 | 0.14 | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAACCTGTTAGCTGTCTTGTCTGATGGAAAGTTCTGGCCAAAAGTCATGACACTGTCGCTCAGGTCCCCCATGCACCCCCTATTTCGGGTGCCACCTTTGCTACTAAAGCATTTTCGGGAAGGGTGTGTTGGGCTGTGGTCTAGTGGCCTGGGACACCTCTCTTGCTGTAGTGACGCTGCCTCTCTCTCCCGCTCCACAGAGTGGAGCCTGGGGCTGCTTTGACGAGTTTAACCGCATCAACATTGAGGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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