| Gene: Elac2 | ID: uc007jks.1_intron_23_0_chr11_64814716_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GGGTTACCCAGTGAGGCCGCATCTCCCGTGCCTGTGAGCCTGTTGTGCTCTTGGTCCATGATGAGTGACAATCACTATGAAAGTATGAAGAAATGTCACCTTGGGCTAGATGCCTGTTGGAACCTGAAAGCAGGTTAGTGACTGAAACTTGGAAGGATGTTCAAAGTCGACTCTAACATGTGCGTGTTCTCCCCACCCAGGAGAGCGTGGCAAACACTTTAGGAGCGCGAGTGTGACACGGCGAGGACTT ......................................................................................................((((.....))))...(((((.((...(((.((((((((((..(((..........)))...)))))...))))).))).)).)))))............................................................ .....................................................................................................102.......................................................................................192........................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................TAGATGCCTGTTGGAACCTGAAAGC....................................................................................................................... | 25 | 1 | 6.00 | 6.00 | 2.00 | - | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................TGGAACCTGAAAGCAGGTTAGTGACTGA......................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCAAAGTCGACTCTAACATGTGCGTGTT.............................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TAGTGACTGAAACTTGGAAGGATGTT......................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTCAAAGTCGACTCTAACATGTGCGT................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TAGGAGCGCGAGTGTGACACGGCGA...... | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCAAAGTCGACTCTAACATGTGCGTGTTC............................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTCAAAGTCGACTCTAACATGTGCGTG................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGCCTGTTGGAACCTGAAAGCAGGTT.................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGCCTGTTGGAACCTGAAAGCAGGTTAGT............................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GTGACTGAAACTTGGAAGGATGTTCAAA..................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TAGGAGCGCGAGTGTGACACGGCGAG..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TTAGTGACTGAAAatgt................................................................................................... | 17 | atgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................TGATGAGTGACAATCACTATGAAAGTATG................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................CCGTGCCTGTGAGCCTGTTGTGCTCTTG..................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................TATGAAAGTATGAAGAAATGTCACCT..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................TGGGCTAGATGCCTGTTGGAACCTGAAAGC....................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................AGATGCCTGTTGGAACCTGAAAGC....................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................AAAGTCGACTCTAACATGTGCGTGTTC............................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................TGTGCTCTTGGTCCATGATGAGTGAC..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................TTTAGGAGCGCGAGTGTGACACGGCG....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................GGTCCATGATGAGctgg..................................................................................................................................................................................... | 17 | ctgg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGGTTACCCAGTGAGGCCGCATCTCCCGTGCCTGTGAGCCTGTTGTGCTCTTGGTCCATGATGAGTGACAATCACTATGAAAGTATGAAGAAATGTCACCTTGGGCTAGATGCCTGTTGGAACCTGAAAGCAGGTTAGTGACTGAAACTTGGAAGGATGTTCAAAGTCGACTCTAACATGTGCGTGTTCTCCCCACCCAGGAGAGCGTGGCAAACACTTTAGGAGCGCGAGTGTGACACGGCGAGGACTT ......................................................................................................((((.....))))...(((((.((...(((.((((((((((..(((..........)))...)))))...))))).))).)).)))))............................................................ .....................................................................................................102.......................................................................................192........................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................GCTCTTGGTCCATGATGAGTGACAATCACTA............................................................................................................................................................................. | 31 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................GCCTGTGAGCCTGTTGTGCTCTTGGTCCATGA............................................................................................................................................................................................. | 32 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GATGAGTGACAATCACTATGAAAGTA..................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................CTCTTGGTCCATGATGAGTGACAATCACTAt............................................................................................................................................................................. | 31 | t | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGATGAGTGACAATCACTATGAAAGTA..................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................GTCGACTCTAACATGTGCGTGTTCTCC.......................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................GGAAGGATGTTCAAAGTCGACTCTAA.......................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................GCCTGTGAGCCTGTTGTGCTCTTGGTCCA................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................TTGGAACCTGAAAGCAGGTTAGTGACTGAAa........................................................................................................ | 31 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................GTTCAAAGTCGACTCTAACATGTGCGTG................................................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGACTGAAACTTGGAAGGATGTTCA....................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................AGCCTGTTGTGCTCTTGGTCCATGATGA.......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGAGAGCGTGGCAAACACTTTAGGA.......................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................GAAGGATGTTCAAAGTCGACTCTAACA........................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................GTGAGCCTGTTGTGCTCTTGGTCCATGA............................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................GCTCTTGGTCCATGATGAGTGACAATCA................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |