| Gene: G3BP | ID: uc007izk.1_intron_0_0_chr11_55283304_f.5p | SPECIES: mm9 |
|
|
(4) OTHER.mut |
(1) PIWI.ip |
(14) TESTES |
| CCGCCACCTCCTCCCACGTAGCAGCCCTGTCCTCCCGCTCAGCCGCGCAGGTACTTGGGCCCGCGGGTGGGGCTGATCGGATGCGGGCCGGGCATGAGCCGAGCTGCGGCCGCGAGCGGGGCGCCCCGGGAGACCGCGCGGCGCGTCCCCACCCCCACCAACGGCCGGCGCGGCCTCCTGCCTGCGCTTTAGGGCCCGCGCGTGGTCCACCGCACCAACGGCGGGCGTCACGCGTCTGGCCGGCCCTGCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................TGATCGGATGCGGGCCGGGCATGAGC....................................................................................................................................................... | 26 | 1 | 15.00 | 15.00 | - | 5.00 | 4.00 | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TCCTGCCTGCGCTTTAGGGCCCGCGC................................................. | 26 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........TCCCACGTAGCAGCCCTGT............................................................................................................................................................................................................................ | 19 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........TCCCACGTAGCAGCCCTG............................................................................................................................................................................................................................. | 18 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..............................................................................................TGAGCCGAGCTGCGGCCGCGAGCGGG.................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................ATCGGATGCGGGCCGGGC............................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................ATCGGATGCGGGCCGGGCATGAGC....................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGATCGGATGCGGGCCGGGCATGAG........................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGAGCCGAGCTGCGGCCGCGAGCGG................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................GCCGGGCATGAGCCGAGCTGC............................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................CGGGCATGAGCCGAGCTG................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....ACCTCCTCCCACGTgcca................................................................................................................................................................................................................................... | 18 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .CGCCACCTCCTCCCACGTAGCAG.................................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TCGGATGCGGGCCGGGCATGAGCCGA.................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................GCGGGCCGGGCATGAGCC...................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................TGATCGGATGCGGGCCGGGCATGA......................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGGGCTGATCGGATGC...................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................GCAGGTACTTGGGCCCGCG......................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................GGTGGGGCTGATCGGA......................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| CCGCCACCTCCTCCCACGTAGCAGCCCTGTCCTCCCGCTCAGCCGCGCAGGTACTTGGGCCCGCGGGTGGGGCTGATCGGATGCGGGCCGGGCATGAGCCGAGCTGCGGCCGCGAGCGGGGCGCCCCGGGAGACCGCGCGGCGCGTCCCCACCCCCACCAACGGCCGGCGCGGCCTCCTGCCTGCGCTTTAGGGCCCGCGCGTGGTCCACCGCACCAACGGCGGGCGTCACGCGTCTGGCCGGCCCTGCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................GGGCGTCACGCGTCTGGCCGGCCCTGa.. | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................................................GTGGTCCACCGCcagg..................................... | 16 | cagg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |