| Gene: Hnrph1 | ID: uc007ism.1_intron_1_0_chr11_50197393_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| TAAAACATTTGACTAGCTCATATGATTAATATAAAGGTTAGTCTGGTTATAGACAATTGGAGTCTTGTAGATAGTAGGCAGAAGGAGACAGTAATGTAAGAACAAGACTGGAAAATTGTAGACATAGAATTACAAGCCCGGTACCACCAGGTACCACATTGGATAAGGAACAAAGCTCTAATGTTCTCTTAACTTAACAGCAAACCAGTCCAGTTACGGTGGCCCAGCCAGCCAGCAGCTGAGTGGTGGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| .........................................................TGGAGTCTTGTAGATAGTAGGCAGAAGG..................................................................................................................................................................... | 28 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GAGTCTTGTAGATAGTAGG............................................................................................................................................................................ | 19 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CATTGGATAAGGAACAAAGCTCTAA..................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................AGTAATGTAAGAACAAGACTGG........................................................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................CATAGAATTACAAGCCCGGTA........................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................ATTGGATAAGGAACAAAGC.......................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GGTACCACCAGGTACCACATTGGATAAGGAACA.............................................................................. | 33 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................TAGACAATTGGAGTCTTGTAGATAGTAG............................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................AGAACAAGACTGGAAAATTGTA.................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TGTAGACATAGAATTACAAGCCCGGTAC.......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................GTAGATAGTAGGCAGAAGG..................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................AATGTAAGAACAAGACTGGAAAATTGTAG................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................................................AACAAGACTGGAAAATTGTAGAC............................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................GAAGGAGACAGTAATGTA........................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................ACAGTAATGTAAGAACAAGA............................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................TAGACAATTGGAGTCTTGTAGATAGTAGGCA.......................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................GACAATTGGAGTCTTGTAGATAGTAGGC........................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................GAAAATTGTAGACATAGAATTACA.................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................AATTGGAGTCTTGTAGA................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................ACGGTGGCCCAGCCAGCCAGCAGCTGAGT...... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................AGAACAAGACTGGAAAATTGTAGACA.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................GTAGACATAGAATTACAAGCCCGGTACCACCAGG................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TAATGTAAGAACAAGAgt............................................................................................................................................. | 18 | gt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................TAATGTAAGAACAAGACTGGAA......................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................GCAGAAGGAGACAGTAATGTAAGAACA.................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................ATTGGAGTCTTGTAGATAGTAGGCAGAAGGAG................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GAAGGAGACAGTAATGT......................................................................................................................................................... | 17 | 3 | 0.67 | 0.67 | - | - | - | 0.33 | 0.33 | - | - | - | - | - | - | - |
| ...............................................................................................................AAAATTGTAGACATAGAAT........................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ................................................................................GAAGGAGACAGTAATGTtta...................................................................................................................................................... | 20 | tta | 0.33 | 0.67 | - | - | - | - | 0.33 | - | - | - | - | - | - | - |
| TAAAACATTTGACTAGCTCATATGATTAATATAAAGGTTAGTCTGGTTATAGACAATTGGAGTCTTGTAGATAGTAGGCAGAAGGAGACAGTAATGTAAGAACAAGACTGGAAAATTGTAGACATAGAATTACAAGCCCGGTACCACCAGGTACCACATTGGATAAGGAACAAAGCTCTAATGTTCTCTTAACTTAACAGCAAACCAGTCCAGTTACGGTGGCCCAGCCAGCCAGCAGCTGAGTGGTGGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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