| Gene: Wwc1 | ID: uc007ili.1_intron_13_0_chr11_35690121_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(9) TESTES |
| TCAGGTGTGGCAGGGGCTGCACACTTCCTATAGAATTTGTATAAAACAGTCTGTGCCTATCCACTACACCGGAGCGCGTTGTTACGACCCAGTTCCTGTGCCTGTGCGCCTGGGCTGGCGAGTGCACCTATTAGGCCGTTTTTGGGAGCTGGAGCACTGCAGCCCTTTGGAGTGTTACTGTCTTGCCTCCTCTCCCTCAGGCTGAAGTTAAATAGCAAGAGGAACCAGCTGGTGCGAGAACTGGAGGAAG .....................................................................................................(((.......(((((.((.(((((.((..((...(((....))).))..)).))))))))))))...((((.((.........)))))).......))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................TTTGGGAGCTGGAGCACTGCAG........................................................................................ | 22 | 1 | 12.00 | 12.00 | 4.00 | 5.00 | - | - | 1.00 | - | 1.00 | - | - | 1.00 |
| .............................................................................................................................................TTGGGAGCTGGAGCACTGCAG........................................................................................ | 21 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTGGGAGCTGGAGCACTGCAGC....................................................................................... | 22 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................TTTTGGGAGCTGGAGCACTGCAG........................................................................................ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTTGGGAGCTGGAGCACTGCAGC....................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................TTTGGGAGCTGGAGCACTGCA......................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................TTTGGGAGCTGGAGCACTGa.......................................................................................... | 20 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| TCAGGTGTGGCAGGGGCTGCACACTTCCTATAGAATTTGTATAAAACAGTCTGTGCCTATCCACTACACCGGAGCGCGTTGTTACGACCCAGTTCCTGTGCCTGTGCGCCTGGGCTGGCGAGTGCACCTATTAGGCCGTTTTTGGGAGCTGGAGCACTGCAGCCCTTTGGAGTGTTACTGTCTTGCCTCCTCTCCCTCAGGCTGAAGTTAAATAGCAAGAGGAACCAGCTGGTGCGAGAACTGGAGGAAG .....................................................................................................(((.......(((((.((.(((((.((..((...(((....))).))..)).))))))))))))...((((.((.........)))))).......))).................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................GAGCGCGTTGTTACGACCCAGTTCCTGTG...................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| ........................................................CCACTACACCGGtatc.................................................................................................................................................................................. | 16 | tatc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - |