| Gene: C230094A16Rik | ID: uc007ihp.1_intron_3_0_chr11_29647534_r.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(10) TESTES |
| GTTGGGGAGGTAGAACACACCCTACCTATGAATTTTAGCATGGGCTGTGGGGCAACGGACTGTTTATTGGCTTTGTAGCCAGGAGCTGAGTTTGGATTTAAAGAAAAGCGTAACTGGGGCAGAGTTAGTGTTGGGAAAGACAGCCAAGAGAGTCTGTGGAACTGAGGAAGCAGATGGACTCAGTTCCTCTCCTCTTGCAGGTGTCAACAGGAGCCTATAAGCGCCAAGTACATGAAGTTCCCCTGGGGAA .............................................................................................................((((..((((((((.((...((((.......)))).....)).)))).(((((((((............))))))))).))))..)))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................GCCAAGAGAGTCTGTGGAACTGAG.................................................................................... | 24 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 |
| ..........................................................................................................................................GACAGCCAAGAGAGTCTGTGGAACTGAG.................................................................................... | 28 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................CCAAGAGAGTCTGTGGAACTGA..................................................................................... | 22 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GCCAAGAGAGTCTGTGGAACTGA..................................................................................... | 23 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................CCAAGAGAGTCTGTGGAACTGAG.................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................AGCCAAGAGAGTCTGTGGAACTGA..................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AGCCAAGAGAGTCTGTGGAACTG...................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................ACAGCCAAGAGAGTCTGTGGA.......................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................AGCCAAGAGAGTCTGTGGAAC........................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| GTTGGGGAGGTAGAACACACCCTACCTATGAATTTTAGCATGGGCTGTGGGGCAACGGACTGTTTATTGGCTTTGTAGCCAGGAGCTGAGTTTGGATTTAAAGAAAAGCGTAACTGGGGCAGAGTTAGTGTTGGGAAAGACAGCCAAGAGAGTCTGTGGAACTGAGGAAGCAGATGGACTCAGTTCCTCTCCTCTTGCAGGTGTCAACAGGAGCCTATAAGCGCCAAGTACATGAAGTTCCCCTGGGGAA .............................................................................................................((((..((((((((.((...((((.......)))).....)).)))).(((((((((............))))))))).))))..)))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................GTCAACAGGAGCCTATAA.............................. | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |