| Gene: Smek2 | ID: uc007igt.1_intron_0_0_chr11_29073808_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(9) TESTES |
| AGGTAGGAATATCGCCCATGAGATGACCCCCGACTCCCGAGCCGCTTTAGGTACAGTCCTGTCGGTTGTACCTATGTAGCATAAAAGGTTTAGAGAAACTCTGCCTTAAAAACAAGTTTCAGTTGTTCCAATCGCCAGGTGCTGGGGAAAACTAAAACGGACTTTCTCTTGGAGTTACTACAGACTGTTGCCACGAAACACACAAGCACGTACATATTTATTGATTGATCCCTCCAAGGCTGCCGTTGTA ...................................................................................................................(((((.((.((..((.((.((((...)))).)).((((..((.((.....)).))..)))).........))..)).)))))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................CAATCGCCAGGTGCTGGGGAAAACTAAAACGGACTTTCTCTTGGAGTTACTA...................................................................... | 52 | 1 | 22.00 | 22.00 | 22.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GCACGTACATATTggcg............................ | 17 | ggcg | 20.00 | 0.00 | - | 10.00 | 7.00 | 1.00 | 2.00 | - | - | - | - |
| ............................................................................................................................................................................................................AGCACGTACATATTggcg............................ | 18 | ggcg | 3.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | 1.00 |
| AGGTAGGAATATCGCCCATGAGATGACCCCCGACTCCCGAGCCGCTTTAGGTACAGTCCTGTCGGTTGTACCTATGTAGCATAAAAGGTTTAGAGAAACTCTGCCTTAAAAACAAGTTTCAGTTGTTCCAATCGCCAGGTGCTGGGGAAAACTAAAACGGACTTTCTCTTGGAGTTACTACAGACTGTTGCCACGAAACACACAAGCACGTACATATTTATTGATTGATCCCTCCAAGGCTGCCGTTGTA ...................................................................................................................(((((.((.((..((.((.((((...)))).)).((((..((.((.....)).))..)))).........))..)).)))))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................CGAGCCGCTTTAGGTACAGTCCTG............................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................CGGACTTTCTCTTGGAGTT.......................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ...........................CCCCGACTCCCGAGCCGCTTTAGGTA..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................GCTTTAGGTACAGTCCTG............................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |