| Gene: Ogdh | ID: uc007hyj.1_intron_0_0_chr11_6192718_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(13) TESTES |
| AGTCCAGGCGTCTTAGGGGACGTGGGTATGCCAGTTTGACAGTCACGCTCTGTCTTGCTCTTGAGCTTGTAGGCTAGGCTCTGAACAAGTCATTGGCTGTTGTGAACCCTTTTAAGCTAGTGTATTTTTCTTCAACAGCTGGGCAAGTTTTATCTCTTTAACATTCTTTTAAAACTTTTCTCTCTTTTTTTTTTAAACAGGTACTTGTGGAAGGCTTCAGGACAAAATGTTTCATTTAAGGACTTGTGCT ....................................................................................................(((...(((.....((((..((..........))..))))))).((((((((.................))))))))...................)))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .......................................................................................................................GTGTATTTTTCTTCAACAGCTGGGCAAGTTTTATCTCTTTAACATTCTTTTA............................................................................... | 52 | 1 | 41.00 | 41.00 | 41.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTGGAAGGCTTCAGGACAAAATGTT................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................ACTTGTGGAAGGCTTCAGGACAAAATttt................... | 29 | ttt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGTACTTGTGGAAGGCTTCAGGAC........................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................................................................ACTTGTGGAAGGCTTCAGGACAAAA....................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTGGAAGGCTTCAGGACAAAATGT.................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGTGGAAGGCTTCAGGACAAAATGT.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGTACTTGTGGAAGGCTTCAGGACAAAAT...................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CTTGTGGAAGGCTTCAGGACAAAATGTT................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GTACTTGTGGAAGGCTTCAGGACAAAA....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGTGGAAGGCTTCAGGACAAAATGTT................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................ACTTGTGGAAGGCTTCAGGACAAAATG..................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................CAGGTACTTGTGGAAGGCTTC................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................AGGTACTTGTGGAAGGCTTCAGGACAAAATGT.................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................TGGAAGGCTTCAGGACAAAATGTTTCATTT............. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGTGGAAGGCTTCAGG............................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| AGTCCAGGCGTCTTAGGGGACGTGGGTATGCCAGTTTGACAGTCACGCTCTGTCTTGCTCTTGAGCTTGTAGGCTAGGCTCTGAACAAGTCATTGGCTGTTGTGAACCCTTTTAAGCTAGTGTATTTTTCTTCAACAGCTGGGCAAGTTTTATCTCTTTAACATTCTTTTAAAACTTTTCTCTCTTTTTTTTTTAAACAGGTACTTGTGGAAGGCTTCAGGACAAAATGTTTCATTTAAGGACTTGTGCT ....................................................................................................(((...(((.....((((..((..........))..))))))).((((((((.................))))))))...................)))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .............................................................................................................................................................................TTCTCTCTTTTTTTTTTAAcaaa...................................................... | 23 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................TCTTGCTCTTGAGCTTttg...................................................................................................................................................................................... | 19 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |