| Gene: Aebp1 | ID: uc007hxg.1_intron_8_0_chr11_5767155_f | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| CCGGAAGGGTGAGGAGCTGGAGGAGGAGTGGGCGCCAGTGGAGAAAATCAGTGAGTAGGCTATGCGGAGGGTGAGGACCCACTCAGGACCATACATGGGACCTGATTCATGGTGCAACTTTGACCCCCCAGAAGCCCATCAGACCATAGACTCTTGCAGCATACAGCGGAGAGTCTCATGAACTGAAGGCAGCCTTCCTCAGCTTCATGCATGCTCCAGCCTGAGGCTGACTGCTTGCATGGTGGGAGGCTTGGGAGGGACAGAGATTCTTGGTATCCAGCAGCTGGCTGGTGGGGGCAGGGCCTCAGGGAGGGAAGCAGCTCTCCAGCTGCCTTTATAGGTTTCATAAGTCTTAAGCATCAGCAGCTCATTCTTTAGATGGCAGGGGAAGCAGGCTTGGAGCAGATTGGCTCCTGGCCTGATCAGAGTTGACTGGCACCCACATGTAAGTGGTACGGGCTGTAGGCTTGTTGGCTCTGGATTAATGGAGGGAGGCTGAGTCTGAACCACTAGCCCACGACGGTGTGTGCATCTGCAGAGTGCCCACCTATTGGGATGGAGTCACACCGCATTGAGGACAACCAGATC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................AGTGAGTAGGCTATGCGGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TCAGACCATAGACTCTTGCAGCATACAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................CATAGACTCTTGCAGCATACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCACTAGCCCACGACG.................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTAATGGAGGGAGGCTGAGTCT..................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................AGAGTCTCATGAACTGAAGGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGAGGAGCTGGAGGAGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TACATGGGACCTGATTCATGGTGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................CATCAGACCATAGACTCTTGCAGCATACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................ATACAGCGGAGAGTCTCATGAACTGA.................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................GAGAAAATCAGTGAGTAGGCTATGag.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | ag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TCAGACCATAGACTCTTGCAGCATACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGCTTGGAGCAGATTG................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAGGGAGGCTGAGTCTGAAC................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................GAAGCCCATCAGACCATAGACTCTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TCATGAACTGAAGGCA............................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 4 | 0.25 | 0.25 | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - |
| CCGGAAGGGTGAGGAGCTGGAGGAGGAGTGGGCGCCAGTGGAGAAAATCAGTGAGTAGGCTATGCGGAGGGTGAGGACCCACTCAGGACCATACATGGGACCTGATTCATGGTGCAACTTTGACCCCCCAGAAGCCCATCAGACCATAGACTCTTGCAGCATACAGCGGAGAGTCTCATGAACTGAAGGCAGCCTTCCTCAGCTTCATGCATGCTCCAGCCTGAGGCTGACTGCTTGCATGGTGGGAGGCTTGGGAGGGACAGAGATTCTTGGTATCCAGCAGCTGGCTGGTGGGGGCAGGGCCTCAGGGAGGGAAGCAGCTCTCCAGCTGCCTTTATAGGTTTCATAAGTCTTAAGCATCAGCAGCTCATTCTTTAGATGGCAGGGGAAGCAGGCTTGGAGCAGATTGGCTCCTGGCCTGATCAGAGTTGACTGGCACCCACATGTAAGTGGTACGGGCTGTAGGCTTGTTGGCTCTGGATTAATGGAGGGAGGCTGAGTCTGAACCACTAGCCCACGACGGTGTGTGCATCTGCAGAGTGCCCACCTATTGGGATGGAGTCACACCGCATTGAGGACAACCAGATC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................................................................................................................................................................GCTGCCTTTATAGGTTTCATAAGTCTTA......................................................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................AAGCCCATCAGACCATAGACTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................GTGGAGAAAATCAGTGAGTAGGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................CAGACCATAGACTCTTGCAGCATACA....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................AGCAGCTCTCCAGCTact.................................................................................................................................................................................................................................................................. | 18 | act | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTGGCCTGATCAGAGTTGACTGG........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GACCCCCCAGAAGCCCATCAGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |