| Gene: Sfi1 | ID: uc007hrs.1_intron_13_0_chr11_3043340_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(15) TESTES |
| ACTTCCACTCTGCACAGCTCTTGAGTCGGGCCTGGAGCATGTGGAGGGAGGTAAGGCTTTGGCATGGGCACAGCCTGAGTGTGGCTTTTGGACAGGTGGGGCTGTTTGTCCACATGACTCAGACAGACAGATGGGTTCCTCCATATGCCTCTGGTCAAGGGCAACTGTGAGGCAGTGATAACTATGTGTGGGGCTGTTATTATCTGAACTTACTGAATGTGAAGTTCCTGTCTGGCCGTTCACAGAAACT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........TCTGCACAGCTCTTGAGTCGGGC........................................................................................................................................................................................................................... | 23 | 1 | 7.00 | 7.00 | - | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................CAGGTGGGGCTGTTTGTCCACATGACTCAGACA............................................................................................................................. | 33 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGGTCAAGGGCAACTGTGAGGCAGTG......................................................................... | 26 | 1 | 5.00 | 5.00 | - | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................GTGATAACTATGTGTGGGGCTGTTATT................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................TGGTCAAGGGCAACTGTGAGGCAGTGA........................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................TGCCTCTGGTCAAGGGCAACTGTGAGG.............................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ......................................ATGTGGAGGGAGGTAgaa.................................................................................................................................................................................................. | 18 | gaa | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........CTGCACAGCTCTTGAGTCGGGCCTGGtgc.................................................................................................................................................................................................................... | 29 | tgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................AGGTAAGGCTTTGGCATGGGCACAGC................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................GGGCAACTGTGAGGCAGTGATAACTA.................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................TGTGGCTTTTGGACAGGTGGGG..................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................GGGGCTGTTATTATCTGAACTTACTGAAT................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GGGCCTGGAGCATGTGGAGGGAG........................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................TCTTGAGTCGGGCCTGGAGCATGTGGAG............................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TATTATCTGAACTTACTGAATGTaaag.......................... | 27 | aaag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TTATTATCTGAACTTACTGAATGTGAA........................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................................................................TGTGTGGGGCTGTTATTATCTGAACTT....................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GGTGGGGCTGTTTGT............................................................................................................................................. | 15 | 18 | 0.06 | 0.06 | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - |
| ACTTCCACTCTGCACAGCTCTTGAGTCGGGCCTGGAGCATGTGGAGGGAGGTAAGGCTTTGGCATGGGCACAGCCTGAGTGTGGCTTTTGGACAGGTGGGGCTGTTTGTCCACATGACTCAGACAGACAGATGGGTTCCTCCATATGCCTCTGGTCAAGGGCAACTGTGAGGCAGTGATAACTATGTGTGGGGCTGTTATTATCTGAACTTACTGAATGTGAAGTTCCTGTCTGGCCGTTCACAGAAACT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................CAGACAGACAGATGGGTTCCTCCA........................................................................................................... | 24 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................CAGACAGACAGATGGGTTCCTCCAc........................................................................................................... | 25 | c | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................CAGACAGACAGATGGGTTCCTCCATAcgt......................................................................................................... | 29 | cgt | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................ACTCAGACAGACAGATGGGTTCCTCCATA......................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GTTCCTCCATATGCCTCTGGTCAAGGG......................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................CAGACAGACAGATGGGTTCCTCCATAc......................................................................................................... | 27 | c | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................AAGTTCCTGTCTGGCCGTTCACAtaca...... | 27 | taca | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGTCAAGGGCAACTGTGAGGCAGTGATA...................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................GCAGTGATAACTATGTGTG............................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................CAGACAGACAGATGGGTTCCTCCATAcgtc......................................................................................................... | 30 | cgtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................................AAGTTCCTGTCTGGCCGTTCACAGAt.... | 26 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |