| Gene: Ccdc131 | ID: uc007hbg.1_intron_27_0_chr10_114864203_f | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GATGATGATGCATTTAACAACCAAGTCCCTTATTTATGGCTGATTTACTGGTGAGACATTCCCCACTGTGGCGAAGACGCTGCATGCTCAGCTTCTCTTGCACTTAGAGTTGATGTACTGAATTATGATGTAATGTGTACTGAATTATGATGTAATGTGTACTGAATTATGATGTAATAAAGAATCAGTGAAGCGGATCCAAAGCGATGCCGAGCCCCGCATCCACTGACAGACAAACGCAAGGAGACTTTACCTAACAAGACTAAACTGGAAGCATTTCTTTTCTTCATTTCTTCAACAGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATG .....................................................(((((((.....(((..(((((((.((((......)))).))).))))...)))....))))).))..........(((((..((((...(((((...)))))..))))...)))))..................................................................................................................................................................................... .................................................50.......................................................................................................................171.................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ..............................................................................................................................................AATTATGATGTAATGTGTACTGAAT........................................................................................................................................................................................ | 25 | 2 | 39.00 | 39.00 | 10.00 | 13.00 | 6.00 | 3.00 | - | 2.00 | 1.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - |
| .......................................................................................................................GAATTATGATGTAATGTGTACTGAAT.............................................................................................................................................................................................................. | 26 | 2 | 17.00 | 17.00 | 9.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................................................................................................................................................TATTAAAGAGACAGTGGAAGCGTATG | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................AGTATTAAAGAGACAGTGGAAGCGTATG | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................GACATTCCCCACTGTGGCGAAGACGC............................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................TATTAAAGAGACAGTGGAAGCGTATGt | 27 | t | 1.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................TGCACTTAGAGTTGATGTACTGAATTA.................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................GAATTATGATGTAATGTGTACTGAATTATGATGTA............................................................................................................................................................................... | 35 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................AATTATGATGTAATGTGTACTGAATTAT........................................................................................................................................................................................................... | 28 | 2 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................TCCCTTATTTATGGCTGATTTACTGG............................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................TTATGGCTGATTTACTG............................................................................................................................................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TTGATGTACTGAATTATagc.............................................................................................................................................................................................................................. | 20 | agc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................AATTATGATGTAATGTGTACTGAATTATG.......................................................................................................................................................................................................... | 29 | 2 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TAAAGAGACAGTGGAA....... | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - |
| GATGATGATGCATTTAACAACCAAGTCCCTTATTTATGGCTGATTTACTGGTGAGACATTCCCCACTGTGGCGAAGACGCTGCATGCTCAGCTTCTCTTGCACTTAGAGTTGATGTACTGAATTATGATGTAATGTGTACTGAATTATGATGTAATGTGTACTGAATTATGATGTAATAAAGAATCAGTGAAGCGGATCCAAAGCGATGCCGAGCCCCGCATCCACTGACAGACAAACGCAAGGAGACTTTACCTAACAAGACTAAACTGGAAGCATTTCTTTTCTTCATTTCTTCAACAGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATG .....................................................(((((((.....(((..(((((((.((((......)))).))).))))...)))....))))).))..........(((((..((((...(((((...)))))..))))...)))))..................................................................................................................................................................................... .................................................50.......................................................................................................................171.................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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