| Gene: Ccdc131 | ID: uc007hbg.1_intron_0_0_chr10_114822864_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(9) TESTES |
| ATTCGGCAGCAGCCAGAGCTGGCGAGAACCCTCTCCACCCCGCAAGAGCTGTATCCTTAACGTGGCGGTCCGCCCTGGGTGTGTCGCCGGAGCTCCCTTTGGCGTCATGGCTAGGTCCCGGAGTTTTTTAACTTTTCAGAACCACTCATTTCTCTCCCCCGTTCGTCGGCGGTTGTCACGGGCCGCACTCCACCGCTATTTTCGTAGGCTGTTTGACTGAATGGGTGCCTTTTGCTTTTGGATAGGACTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTATCCTTAACGTGGCGGTCCGCCCTGGGTGTGTCGCCGGAGCTCCCTTTGG.................................................................................................................................................... | 52 | 1 | 91.00 | 91.00 | 91.00 | - | - | - | - | - | - | - | - |
| ............................................AGAGCTGTATCCTTAACGTGG......................................................................................................................................................................................... | 21 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................GTAGGCTGTTTGACTGAATGGGggcc..................... | 26 | ggcc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................................................TGCTTTTGGATAGGAagag | 19 | agag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................................GCCTTTTGCTTTTGGATAG..... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................AAGAGCTGTATCCTTAACGTGGCGGTC.................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ATTCGGCAGCAGCCAGAGCTGGCGAGAACCCTCTCCACCCCGCAAGAGCTGTATCCTTAACGTGGCGGTCCGCCCTGGGTGTGTCGCCGGAGCTCCCTTTGGCGTCATGGCTAGGTCCCGGAGTTTTTTAACTTTTCAGAACCACTCATTTCTCTCCCCCGTTCGTCGGCGGTTGTCACGGGCCGCACTCCACCGCTATTTTCGTAGGCTGTTTGACTGAATGGGTGCCTTTTGCTTTTGGATAGGACTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................TGGCGGTCCGCCCTGGGTGTG....................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................GCCCTGGGTGTGTCGCCGGA............................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................GCTCCCTTTGGCggcc................................................................................................................................................... | 16 | ggcc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |
| .................................TCCACCCCGCAAGAGCTGTATCCTTAACGT........................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |