| Gene: Ppp1r12a | ID: uc007gzc.1_intron_15_0_chr10_107698093_f | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CATCTAGAGAAGATGAATATAAACAAAAGTATTCAAGAACATACGATGAGGTAATGCTGTGGGCAGCACAGCTGGTCTGCTTGGCTCTTAGCGTTCTCACAGTGCTGAGATGTATGGTCTCATAAGCAGTGTGGCGTGCATGAGAGGCGTAGGCTGGAGTCTGACAGCTTTGGCATGATGAGAACGATATTGTTCTTTTGAAATCAGTTTGTGTTTTATGTGTCTTTAATATTTCAAATGGGTTTTAATGCTTCCCAGACTTACACACGTTATAGACCTGTGTCAACTTCAAGTTCAAGCGCTCCGTC |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475281(GSM475281) total RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................GGAGTCTGACAGCTTTGGCATGATGAGA............................................................................................................................. | 28 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GAGTCTGACAGCTTTGGCATGATGAGAACG.......................................................................................................................... | 30 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................GGAGTCTGACAGCTTTGGCATGATGAGAACG.......................................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGGAGTCTGACAGCTTTGGCATGATGAGAACGA......................................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GAGTCTGACAGCTTTGGCATGATGAGAA............................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....TAGAGAAGATGAATATAAACAAAAGTA..................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................GAGTCTGACAGCTTTGGCATGATGAG.............................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GAGTCTGACAGCTTTGGCATGATGAGAACGA......................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................AGTCTGACAGCTTTGGCATGATGAGAACGA......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................CAAGAACATACGATGAG.................................................................................................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................GGAGTCTGACAGCTTTGGCATGATGAGAACGAT........................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................ATAGACCTGTGTCAACTTCAAGTTCAAGCG....... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................GTGGGCAGCACAGCTcctt....................................................................................................................................................................................................................................... | 19 | cctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TAGACCTGTGTCAACTTCAAGTTCAAGCGC...... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TAGACCTGTGTCAACTTCAAGTTCAAGagc...... | 30 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GAGTCTGACAGCTTTGGCATGATGAGA............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....TAGAGAAGATGAATATAAACAAAAGT...................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CATGAGAGGCGTAGaat......................................................................................................................................................... | 17 | aat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TAGACCTGTGTCAACTTCAAGTTCAAGCG....... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................GGAGTCTGACAGCTTTGGCATGATGAGAACGA......................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TCTGACAGCTTTGGCATGA.................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...CTAGAGAAGATGAATATAAACAAAAGTATT................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................GGAGTCTGACAGCTTTGGCATGATGAG.............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................AGCACAGCTGGTCTGCTTG................................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................TGGAGTCTGACAGCTTTGGCATGATGAG.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CATCTAGAGAAGATGAATATAAACAAAAGTATTCAAGAACATACGATGAGGTAATGCTGTGGGCAGCACAGCTGGTCTGCTTGGCTCTTAGCGTTCTCACAGTGCTGAGATGTATGGTCTCATAAGCAGTGTGGCGTGCATGAGAGGCGTAGGCTGGAGTCTGACAGCTTTGGCATGATGAGAACGATATTGTTCTTTTGAAATCAGTTTGTGTTTTATGTGTCTTTAATATTTCAAATGGGTTTTAATGCTTCCCAGACTTACACACGTTATAGACCTGTGTCAACTTCAAGTTCAAGCGCTCCGTC |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475281(GSM475281) total RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................TGACAGCTTTGGCATaaa.................................................................................................................................... | 18 | aaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TGTGGGCAGCACAGCTGttt.......................................................................................................................................................................................................................................... | 20 | ttt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TGTGGGCAGCACAGCTGcaa.......................................................................................................................................................................................................................................... | 20 | caa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGTGGGCAGCACAGCTGcc.......................................................................................................................................................................................................................................... | 19 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |