| Gene: mKIAA1981 | ID: uc007gjb.1_intron_0_0_chr10_81096501_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(20) TESTES |
| TGCGGTTCGCCATGAAGCAGCTGTGCCTGTGTGCTGCTGCCTCCTTCGCGGTAGGCGTTTGGGTCCCTCTGCGCCTTCCCCTCTTTCCTAGAAAGAAGTTCGGCAGAGGGCGGGGCGCCTGTAGAGCCTGGGCGGGAAGTGGAGGGCGGTGTTGAGGGCAGGCGTGTCTGTGCAGGCGTGGGGTCAGCAGGCCGTTGCGGGATGCAGGTCTTGGAGGACACTGTGGACAGTGAGTGACTCAGGAACTGTC ....................................................((((((..((....))..))))))(((((((((((((........(((((((...(((((...))))).....))).)))))))))..)))))).))..................................................................................................... ...............................................48....................................................................................................150.................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................TGGGCGGGAAGTGGAGGG........................................................................................................ | 18 | 1 | 50.00 | 50.00 | 24.00 | 5.00 | 12.00 | 2.00 | 5.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGG........................................................................................................ | 19 | 1 | 45.00 | 45.00 | 13.00 | 12.00 | 4.00 | 10.00 | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGg....................................................................................................... | 20 | g | 7.00 | 45.00 | 3.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................GCGGGAAGTGGAGGGgggg.................................................................................................... | 19 | gggg | 3.00 | 0.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGGGCGGGAAGTGGAGGGg....................................................................................................... | 19 | g | 3.00 | 50.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGta...................................................................................................... | 21 | ta | 2.00 | 45.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AGGCGTTTGGGTCCCTCTGCGC................................................................................................................................................................................ | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TCCTAGAAAGAAGTTCGGCAGAGGGCGt......................................................................................................................................... | 28 | t | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGga...................................................................................................... | 21 | ga | 2.00 | 45.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGgaa..................................................................................................... | 22 | gaa | 1.00 | 45.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TTCGCCATGAAGCAGCTGTG................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGtaa..................................................................................................... | 22 | taa | 1.00 | 45.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGtaat.................................................................................................... | 23 | taat | 1.00 | 45.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................GTGGACAGTGAGTGACTCAGGAACTG.. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................TTCCTAGAAAGAAGTTCGGCAGAGGGC........................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................TGGGCGGGAAGTGGAGGGt....................................................................................................... | 19 | t | 1.00 | 50.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TAGAAAGAAGTTCGGCAGAGGGCGGG........................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................CTCCTTCGCGGTAGGCGTTTGGG........................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGAGGGt....................................................................................................... | 20 | t | 1.00 | 45.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TTCGCCATGAAGCAGCTG................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGGAGGACACTGTGGACAGTGAGTGAC............ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................ATGCAGGTCTTGGAGGACACTGTGGACAGTGA................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGGGCGGGAAGTGGAGGGgga..................................................................................................... | 21 | gga | 1.00 | 50.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................GGGCGCCTGTAGAGCCTGGGCGGGAAGTGGAG.......................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................ACACTGTGGACAGTGAGTGA............. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGGGCGGGAAGTGGcggg........................................................................................................ | 19 | cggg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................GTGGACAGTGAGTGACTC.......... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| .....................................................................................................................................................................................................................GAGGACACTGTGGACAG.................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| TGCGGTTCGCCATGAAGCAGCTGTGCCTGTGTGCTGCTGCCTCCTTCGCGGTAGGCGTTTGGGTCCCTCTGCGCCTTCCCCTCTTTCCTAGAAAGAAGTTCGGCAGAGGGCGGGGCGCCTGTAGAGCCTGGGCGGGAAGTGGAGGGCGGTGTTGAGGGCAGGCGTGTCTGTGCAGGCGTGGGGTCAGCAGGCCGTTGCGGGATGCAGGTCTTGGAGGACACTGTGGACAGTGAGTGACTCAGGAACTGTC ....................................................((((((..((....))..))))))(((((((((((((........(((((((...(((((...))))).....))).)))))))))..)))))).))..................................................................................................... ...............................................48....................................................................................................150.................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................CCTGTGTGCTGCTGCCTCCTTCGC......................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................GCCTCCTTCGCGGtacc....................................................................................................................................................................................................... | 17 | tacc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TGTGCTGCTGCCTCCTTCGCGGT...................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................GGTCAGCAGGCCGTTacc...................................................... | 18 | acc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |