| Gene: Slc39a3 | ID: uc007gfr.1_intron_2_0_chr10_80497751_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GACAGCATGTCCCTGTGGTCCCCTTTCTCCACCTCCAAAGTTCCAGGACAACCCAGATATATACAGTCCCTTTGGTGCAGTAGAAGGGACAGGGCTAGGGCAGGGACAGGATGCCGCTGACTGCAGAGGGTGAGCCGGGGTGTGTTCAGCAGCACGAGGGAAGCAGCTTCACTCCTAATGAACCATGCTTTGTGAGGCAGGAGAACACGTAAGAACAACCCTACATTTTGGCCACCACATCCACTGAGCC ...............................................................................................................((((.......(((...(((......(((.(((...(((.((.........)).))).))).))).....))).))).......))))................................................... ..........................................................................................................107..........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
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| .........................................................................................................................................................................................TGCTTTGTGAGGCAGGAGAACACGTA....................................... | 26 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGCCGCTGACTGCAGAGGGTGAGCCGG................................................................................................................ | 27 | 1 | 5.00 | 5.00 | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................TAATGAACCATGCTTTGTGAGGCAGG................................................. | 26 | 1 | 5.00 | 5.00 | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - |
| ...............................................................................................................................................................................TAATGAACCATGCTTTGTGAGGCAG.................................................. | 25 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TTGGTGCAGTAGAAGGGACAGGGCTAG........................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGACTGCAGAGGGTGAGCCGGG............................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TATATACAGTCCCTTaatt.............................................................................................................................................................................. | 19 | aatt | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGCCGCTGACTGCAGAGGGTGAGCCGtt............................................................................................................... | 28 | tt | 2.00 | 0.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGTGCAGTAGAAGGGACAGGGC........................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGAACCATGCTTTGTGAGGCAGGAGAAC............................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TTCTCCACCTCCAAAGTTCCAGGACAACCC.................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TATACAGTCCCTTTGGTGCAGTAGAAG.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TACATTTTGGCCACCACATCCACTG.... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................GAGGCAGGAGAACACGTAAGAACAACCCTtgg......................... | 32 | tgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................TTTGGTGCAGTAGAAGGGACAGGGCTtc........................................................................................................................................................ | 28 | tc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TAAGAACAACCCTACATTTTGGCCAC............... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGAGGCAGGAGAACACGTAAGAACAACCC............................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................TTCCAGGACAACCCAGATATATACAGTCac.................................................................................................................................................................................... | 30 | ac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGAGGCAGGAGAACACGTAAGAACAAC............................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................CAGGGACAGGATGCCGCTGACTGCAGA........................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGTGCAGTAGAAGGGACAGGGCTAtt....................................................................................................................................................... | 27 | tt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGGTGCAGTAGAAGGGACAGGGCTAGat...................................................................................................................................................... | 28 | at | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................AGGCAGGAGAACACGTAAGAACAACCCT............................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TACATTTTGGCCACCACATCCACTGA... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GAACAACCCTACATTTTGGCCACCACATC......... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGTGAGGCAGGAGAACACGTAAGAAC.................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TAATGAACCATGCTTTGTGAGGCAGGA................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TCCTAATGAACCATGCTTTGTGAGGCA................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GAACACGTAAGAACAACCCTACATTTTGGCC................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGAACCATGCTTTGTGAGGCAGGAGAA............................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATGCCGCTGACTGCAGAGGGTGAGCCG................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................ACATTTTGGCCACCACATCCACTGAGC. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................CTTTGGTGCAGTAGAAGGGACAGGGCT.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTTGTGAGGCAGGAGAACACGTAAt..................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................GCAGCACGAGGGAAGCAG.................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| GACAGCATGTCCCTGTGGTCCCCTTTCTCCACCTCCAAAGTTCCAGGACAACCCAGATATATACAGTCCCTTTGGTGCAGTAGAAGGGACAGGGCTAGGGCAGGGACAGGATGCCGCTGACTGCAGAGGGTGAGCCGGGGTGTGTTCAGCAGCACGAGGGAAGCAGCTTCACTCCTAATGAACCATGCTTTGTGAGGCAGGAGAACACGTAAGAACAACCCTACATTTTGGCCACCACATCCACTGAGCC ...............................................................................................................((((.......(((...(((......(((.(((...(((.((.........)).))).))).))).....))).))).......))))................................................... ..........................................................................................................107..........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
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