| Gene: Dos | ID: uc007gbx.1_intron_4_0_chr10_79598292_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| TTTAAGCCCAGCCTGGTCTACATAGAGAGACCTTGTCTCAGAAATTAAACAAAAACCTGTCACCCCAGCATTTGATAGGTGGAGGCATGAGAATTAAAAGCTCAAAGTCTTAAACAGGGAGAGACCTGTCTGTCAAGATGTTAAATGTAGGTGCTATGCGAGGGACTGCCAAGGGCTGACTGCTGGGGTCCCCAACATAGGTACACCCTGACAGAAGGGGATTTCCATCACCTCAAGAATGCCCGCCTCA .................................................................((((.((((((((...(((((.((((.........))))..)))))..(((((......))))))))))))).........((.(((.((..(((......)))..)).))).)).))))................................................................. .................................................................66........................................................................................................................188............................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................TGTCAAGATGTTAAATGTAGGTGCTATG............................................................................................ | 28 | 1 | 5.00 | 5.00 | 1.00 | - | - | 4.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GATGTTAAATGTAGGTGCTATGCGAG........................................................................................ | 26 | 1 | 4.00 | 4.00 | 1.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGA................................................................................................................................................................ | 20 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGAGAATTAAA........................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGAGAATT........................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGCGAGGGACTGCCAAGGGCTGACTGCT.................................................................. | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................TGCGAGGGACTGCCAAGGGCTGACTGCTGG................................................................ | 30 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TAAATGTAGGTGCTATGCGAGGGA..................................................................................... | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TGTCAAGATGTTAAATGTAGGTGCTA.............................................................................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....GCCCAGCCTGGTCTACcgt.................................................................................................................................................................................................................................. | 19 | cgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................TTAAAAGCTCAAAGTCTTAAACAGGGA.................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................TCTGTCAAGATGTTAAATGTAGGTGC................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TGTCAAGATGTTAAATGTAGGTGC................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGTTAAATGTAGGTGCTATGCGAGG....................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TGTCAAGATGTTAAATGTAGGTGCTAT............................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGAGAATTAA......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................GAAATTAAACAAAAACCTGTCACCCC........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................AGATGTTAAATGTAGGTGCTATGtg.......................................................................................... | 25 | tg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TAAATGTAGGTGCTATGCGAGGGAC.................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGATAGGTGGAGGCATGAGAATTAA......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GATGTTAAATGTAGGTGCTATGCGAGG....................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TCAAGATGTTAAATGTAGGTGCTATGCG.......................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGCGAGGGACTGCCAAGGGCTGACTGC................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TAAATGTAGGTGCTATGCGAGGGACTG.................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................TGCGAGGGACTGCCAAGGGCTGACTGt................................................................... | 27 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................ATTAAACAAAAACCTGTCACCCCAGC..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TAAATGTAGGTGCTATGCGAGGGACT................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................TGTCTGTCAAGATGTTAAATGTAGGTGC................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................ATAGGTGGAGGCATGAGAATTAAAAGC..................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................TGTCAAGATGTTAAATGTAGGTG................................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGTAGGTGCTATGCGAGGGACTGCCA............................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGAGAATTA.......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGATAGGTGGAGGCATGAGAATTAAAAGC..................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................GATGTTAAATGTAGGTGCTATGCGA......................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................TGATAGGTGGAGGCATGAGAATTA.......................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTTGATAGGTGGAGGCATGAG............................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................AGGGACTGCCAAGGGC.......................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| TTTAAGCCCAGCCTGGTCTACATAGAGAGACCTTGTCTCAGAAATTAAACAAAAACCTGTCACCCCAGCATTTGATAGGTGGAGGCATGAGAATTAAAAGCTCAAAGTCTTAAACAGGGAGAGACCTGTCTGTCAAGATGTTAAATGTAGGTGCTATGCGAGGGACTGCCAAGGGCTGACTGCTGGGGTCCCCAACATAGGTACACCCTGACAGAAGGGGATTTCCATCACCTCAAGAATGCCCGCCTCA .................................................................((((.((((((((...(((((.((((.........))))..)))))..(((((......))))))))))))).........((.(((.((..(((......)))..)).))).)).))))................................................................. .................................................................66........................................................................................................................188............................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........GCCTGGTCTACATAGAGAGACCTTGTCTCAGAA............................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .TTAAGCCCAGCCTGGTCTACATAGAGA.............................................................................................................................................................................................................................. | 27 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 |