| Gene: Pdxk | ID: uc007fxu.2_intron_3_0_chr10_77907840_r.3p | SPECIES: mm9 |
|
|
|
(4) OTHER.mut |
(3) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| ATGGCTGGGCACTGGCTTGGCCATGTGTCTGCAAAGTTCCAGGGTCTCTGGAAGCCCATCAAGCATGCTGGTCATGCCTGGCTGCTCCATCTCTAATTGCAGAGAGGACAGTGACCTACAGGGGCCTGTCCCCTTGGGAAGCTTGCCTGTCAGGGAGAGCCCCAGTGTGTGGATGCTGACACTCTCCCTTGTGCTGGCAGGTGATGGACATGCTGCACTGTATGGGTCCCGACACTGTGGTCATCACCAG ............................................................................................................................................(((((((.(((((((((((...((((((....))))))...))))))).)).)).)))))))................................................ ........................................................................................................................................137..................................................................206.......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................ACACTCTCCCTTGTGCTGGCAG.................................................. | 22 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGATGGACATGCTGCACTGTATGGG........................ | 25 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACACTCTCCCTTGTGCTGGCAGt................................................. | 23 | t | 3.00 | 5.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACACT.............. | 26 | 2 | 2.50 | 2.50 | 1.50 | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CACTCTCCCTTGTGCTGGCAGt................................................. | 22 | t | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACACTCTCCCTTGTGCTGGCAGtt................................................ | 24 | tt | 2.00 | 5.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGACACTGTG........... | 26 | 2 | 1.50 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGACACTGTGGT......... | 28 | 2 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGATGGACATGCTGCACTGTATGGGTC...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................ATGCTGCACTGTATGGG........................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACACTCTCCCTTGTGCTGGCAGa................................................. | 23 | a | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................GACACTCTCCCTTGTGCTGGCAGt................................................. | 24 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGACACTGTGGTC........ | 29 | 2 | 1.00 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................CTTGCCTGTCAGGGAGAGCCCCA...................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GATGGACATGCTGCACTGTATGGG........................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGACACTG............. | 24 | 2 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................GATGGACATGCTGCACTGTATGGGT....................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGAga................ | 21 | ga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TGACACTCTCCCTTGTGCTGGCA................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACACTGTa........... | 29 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TATGGGTCCCGACACTGTGGTCATCA.... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACACTt............. | 27 | t | 0.50 | 2.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACTGTATGGGTCCCGACACTGTGGTt........ | 29 | t | 0.50 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACA................ | 24 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACAC............... | 25 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCTGCACTGTATGGGTCCCGACACTG............. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGTATGGGTCCCGACACTGTGGTCATCA.... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CTGCACTGTATGGGTCCCGACAC............... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ........................................................................................................................................................................................................................ACTGTATGGGTCCCGACACTGTGGTC........ | 26 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATGGCTGGGCACTGGCTTGGCCATGTGTCTGCAAAGTTCCAGGGTCTCTGGAAGCCCATCAAGCATGCTGGTCATGCCTGGCTGCTCCATCTCTAATTGCAGAGAGGACAGTGACCTACAGGGGCCTGTCCCCTTGGGAAGCTTGCCTGTCAGGGAGAGCCCCAGTGTGTGGATGCTGACACTCTCCCTTGTGCTGGCAGGTGATGGACATGCTGCACTGTATGGGTCCCGACACTGTGGTCATCACCAG ............................................................................................................................................(((((((.(((((((((((...((((((....))))))...))))))).)).)).)))))))................................................ ........................................................................................................................................137..................................................................206.......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................ACCTACAGGGGCCTGat.......................................................................................................................... | 17 | at | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |