(1)
OTHER.ip
(5)
OTHER.mut
(6)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(32)
TESTES

Sense strand
AGTGCTGATGTTGTCTGTCTTCTCTTTCAGGCTGCGGGAGCTGGCTGGAGGTGAGGATCTGGTGGGCACTGAGGTGGTCCCTCCAATACACATGTGCATTTGCGCACATGCGCAGAGCATGCGAAATGTCTGCAGCGACCTGTGTCTCGGTGGGGGAAGGGTTAGGCTCAAAGGCTCCACAGCACTCACTGTTCCTCTGAGGTCACTGAGGGGTGCTTCCTGAGGCCATGAACTCATGTCTGGTATTTGGAGGTGAAGCTCACACTGTGTTTGTGTGTTGTGCATGTGATGGGTTTTACCAGCGCCCAGGAGGCCCCACTGCGCATGTGTAGCTTCGTGCACTCCCAGCATTAGCCTGTACTGTCCGGCTGGAATAGACAGTGGCATAGCACATGTGCCTCAGGTGGCCTCCATATTTCCCTGGCCCTGAGCTGGGTCTGTGGGGACCGTGACACAGAATGGAGCTGACCTATCCCCTCAGCACCCTGACTGCCACCCTGGTTCTCAGGCACTTTCCCAGAGGATGATGTCCCTGAAAAAGCCTACAAGAAGATGCTG
...........................................................................................................................................................................................................................................................................................................................................................................................................................(((..(((((.(((((......)))))...)))))..))).........((.(((((.........))))).))((((..(((.....)))..))))..................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................409................................................................................................508................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesWT3()
Testes Data. (testes)
..................................................GTGAGGATCTGGTGGGCACTGAGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 35.00 35.00 10.00 3.00 3.00 6.00 3.00 1.00 1.00 - - - - - 1.00 3.00 - - 1.00 2.00 - - 1.00 - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 4.00 4.00 1.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 4.00 4.00 - - 1.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 4.00 4.00 - - 1.00 - - - 2.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGGTGt................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 t 3.00 35.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGGTGGTCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 31 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGGACCGTGACACAGAATGGAGC............................................................................................. 27 1 2.00 2.00 - - - - - - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................TGTCCGGCTGGAATAGACAGTGGCATt.......................................................................................................................................................................... 27 t 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACCGTGACACAGAATGGAGCT............................................................................................ 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................AATGTCTGCAGCGACCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................... 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................TGTCTGCAGCGACCTGTGTCTCGGT....................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................TGAGGATCTGGTGGGCACTGAGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................TTTGTGTGTTGTGCATGTGATGGGTT....................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.................................................GGTGAGGATCTGGTaaat........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 aaat 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................TGAGGATCTGGTGGGCACTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TCTGAGGTCACTGAGGGGTGCTTCCTGA............................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGCCACCCTGGTTCTCAGG................................................. 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
....................................................GAGGATCTGGTGGGCACTGAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATGATGTCCCTGAAAAAGCCTA............. 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACCGTGACACAGAATGGAGCTG........................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGGa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 a 1.00 4.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGGATCTGGTGGGCACTGAGGTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....TGATGTTGTCTGTCTTCTCTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATGATGTCCCTGAAAAAGCCTAC............ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGGACCGTGACACAGAATGGA............................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGACACAGAATGGAGCTGAC......................................................................................... 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................TGTTTGTGTGTTGTGCATGTGATGGG......................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...................................................TGAGGATCTGGTGGGCACTGAGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................TGTCTGCAGCGACCTGTGTCTCGGTG...................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATGATGTCCCTGAAAAAG................. 23 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGATGATGTCCCTGAAAAAGCCTACA........... 30 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGATGATGTCCCTGAAAAAGCCTA............. 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGCCTACAAGAAGATGCTG 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTGAGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................TGAGGATCTGGTGGGCACTGAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................TGCAGCGACCTGTGTCTCGGTGGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................TGAACTCATGTCTGGTATTTGGAGGTG............................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGGACCGTGACACAGAATGGAGCTG........................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
................................................................................................................................................................................................................................................................................................................CCCAGGAGGCCCCACTGCGCATGTGTA................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGACCGTGACACAGAATGGAGCTGACCTt...................................................................................... 32 t 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................GCATGCGAAATGTCTGCAGCGACCTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................GAGGGGTGCTTCCTGAGGCCATGAACTC................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.........................................................................................................................................................................................................................................................................TGTGTTTGTGTGTTGTGCATGTGATG........................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..................................................GTGAGGATCTGGTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 16 3 1.00 1.00 - 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.33
........................................................................................................................................................................................................................................................................................................................................................................CTGTCCGGCTGGAATAGACAGTGGCAT........................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGGATCTGGTGGGCACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.......................................................................................................................TGCGAAATGTCTGCAGCGACCTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCTGACCTATCCCCTCAGCACCCT....................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -

Antisense strand
AGTGCTGATGTTGTCTGTCTTCTCTTTCAGGCTGCGGGAGCTGGCTGGAGGTGAGGATCTGGTGGGCACTGAGGTGGTCCCTCCAATACACATGTGCATTTGCGCACATGCGCAGAGCATGCGAAATGTCTGCAGCGACCTGTGTCTCGGTGGGGGAAGGGTTAGGCTCAAAGGCTCCACAGCACTCACTGTTCCTCTGAGGTCACTGAGGGGTGCTTCCTGAGGCCATGAACTCATGTCTGGTATTTGGAGGTGAAGCTCACACTGTGTTTGTGTGTTGTGCATGTGATGGGTTTTACCAGCGCCCAGGAGGCCCCACTGCGCATGTGTAGCTTCGTGCACTCCCAGCATTAGCCTGTACTGTCCGGCTGGAATAGACAGTGGCATAGCACATGTGCCTCAGGTGGCCTCCATATTTCCCTGGCCCTGAGCTGGGTCTGTGGGGACCGTGACACAGAATGGAGCTGACCTATCCCCTCAGCACCCTGACTGCCACCCTGGTTCTCAGGCACTTTCCCAGAGGATGATGTCCCTGAAAAAGCCTACAAGAAGATGCTG
...........................................................................................................................................................................................................................................................................................................................................................................................................................(((..(((((.(((((......)))))...)))))..))).........((.(((((.........))))).))((((..(((.....)))..))))..................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................409................................................................................................508................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
mjTestesWT3()
Testes Data. (testes)
............................................................................................................................................................................................TCCTCTGAGGTCACTGctgt.............................................................................................................................................................................................................................................................................................................................................................. 20 ctgt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -