| Gene: Pfkl | ID: uc007fwo.1_intron_7_0_chr10_77454187_r.3p | SPECIES: mm9 |
|
|
|
(5) OTHER.mut |
(1) PIWI.ip |
(17) TESTES |
| CCCAACGAGGGTGTTGAGTACGTGCCCAGGCCTCTCGAATCTGTGTTTCTGTTCCACATGAAGCCACGGAGAGGCCCTTTGGGGACAGACCTCTGGCTCTGGGAAAGGCTGAGCCACACATTTTTCTGAGATGAGAGGCACTCTGGTTTTGTGAGTTGTATGTATGCCTCCTAGCCAGGCTGATGTCTCTCTAACCACAGGACACTGCCCAAGCCCCACCTGGAGGCCATTGTGGAGAATCTCCGCACCT ....................................................................................................................................((((((((.(((((((....(((..((....))..)))..)))))))....))))))))........................................................... ..............................................................................................................................127......................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................TGAGAGGCACTCTGGTTTTGTGA................................................................................................ | 23 | 1 | 13.00 | 13.00 | - | 3.00 | 3.00 | 2.00 | - | 2.00 | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................GATGAGAGGCACTCTGGTTTTGTGt................................................................................................ | 25 | t | 6.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................ATGAGAGGCACTCTGGTTTTGTG................................................................................................. | 23 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................CTAGCCAGGCTGATGTCTCTCT.......................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................GATGAGAGGCACTCTGGTTTTGTGA................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................CTAGCCAGGCTGATGTCTCTCTAACC...................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................TAGCCAGGCTGATGTCTCTCT.......................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................ATGAGAGGCACTCTGGTTTTGTGA................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................TGAGAGGCACTCTGGTTTTGTGt................................................................................................ | 23 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................ATGAGAGGCACTCTGGTTTTGTGt................................................................................................ | 24 | t | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................GATGAGAGGCACTCTGGTTTT.................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................GATGAGAGGCACTCTGGTTTTGT.................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................ATGAGAGGCACTCTGGTTTTG................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CCCAACGAGGGTGTTGAGTACGTGCCCAGGCCTCTCGAATCTGTGTTTCTGTTCCACATGAAGCCACGGAGAGGCCCTTTGGGGACAGACCTCTGGCTCTGGGAAAGGCTGAGCCACACATTTTTCTGAGATGAGAGGCACTCTGGTTTTGTGAGTTGTATGTATGCCTCCTAGCCAGGCTGATGTCTCTCTAACCACAGGACACTGCCCAAGCCCCACCTGGAGGCCATTGTGGAGAATCTCCGCACCT ....................................................................................................................................((((((((.(((((((....(((..((....))..)))..)))))))....))))))))........................................................... ..............................................................................................................................127......................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|