(2)
OTHER.mut
(4)
PIWI.ip
(1)
PIWI.mut
(15)
TESTES

Sense strand
TTGATAAACTAAGTAGAAGAGGCAATAGGTCCATTAATTAAAAAAAAAAAGTTTCAAAGTGCATTCTAGCCCCGAGCAGTTACATCCTTGGTCAATGTATAGTTCCTCACGTTTGCATCGAGGAGAGAAATGCACACACACACACATCACTTACCCAGCTACAAAGAGATAAAGGAATCTATAAATTTTGCATTTACAAGATCCTGCAACGAAGGCGTTGTAAGTTACTCTTTCTGGGCACCACAGGTTC
.................................................................................................................((((((.......))..))))................................((((......))))......................................................................
................................................................................................................113................................................................180....................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
..................................................................................................................................................................................................TACAAGATCCTGCAACGAAGGCGTTGT............................. 27 1 22.00 22.00 7.00 6.00 4.00 2.00 2.00 - - - - - - - - 1.00 -
....TAAACTAAGTAGAAGAGGCAATAGGTCC.......................................................................................................................................................................................................................... 28 1 16.00 16.00 4.00 8.00 2.00 - 2.00 - - - - - - - - - -
..................................................................................................................................................................................................TACAAGATCCTGCAACGAAGGCGTTG.............................. 26 1 11.00 11.00 3.00 3.00 1.00 3.00 - - - - - - - - 1.00 - -
.....................................................................................................................TCGAGGAGAGAAATGCACACACACACAC......................................................................................................... 28 1 6.00 6.00 5.00 1.00 - - - - - - - - - - - - -
.....................................................................................................................TCGAGGAGAGAAATGCACACACACACA.......................................................................................................... 27 1 6.00 6.00 3.00 2.00 - - 1.00 - - - - - - - - - -
............................................................................................................................................................................................................TGCAACGAAGGCGTTGTAAGTTACTC.................... 26 1 4.00 4.00 2.00 - - 1.00 - - - - - - - - - - 1.00
...................................................................................................................................................................................................................AAGGCGTTGTAAGTTACTCTTTCTGGGC........... 28 1 2.00 2.00 - - - - - - - - - - 2.00 - - - -
..........................................................................................................................................................................................................................TGTAAGTTACTCTTTCTGGGCACCACAG.... 28 1 2.00 2.00 - - 2.00 - - - - - - - - - - - -
..................................................................TAGCCCCGAGCAGTTACATCCTTGGTC............................................................................................................................................................. 27 1 2.00 2.00 - - - - - 1.00 - - - 1.00 - - - - -
.TGATAAACTAAGTAGAAGAGGCAATAGG............................................................................................................................................................................................................................. 28 1 2.00 2.00 2.00 - - - - - - - - - - - - - -
.....................................................................................................................TCGAGGAGAGAAATGCACACACACACACA........................................................................................................ 29 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - -
..................................................................................................................................................TCACTTACCCAGCTACAAAGAGATAAAGGA.......................................................................... 30 1 1.00 1.00 - - - - - 1.00 - - - - - - - - -
.................................................................................................................TGCATCGAGGAGAGAAATGCACACACACAC........................................................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - -
.........TAAGTAGAAGAGGCAATAGGTCCATTA...................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -
............................................................................................................................................................................................................TGCAACGAAGGCGTTGTAAGTTACTCTT.................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - -
..................................................................TAGCCCCGAGCAGTTACATCCTTGG............................................................................................................................................................... 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - -
.................................................................................................................................................................................................TTACAAGATCCTGCAACGAAGGCGTTG.............................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - -
.........TAAGTAGAAGAGGCAATAGGTCCATT....................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -
..................................................................................................................................................TCACTTACCCAGCTACAAAGAGATAA.............................................................................. 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - -
..................................................................................................................................................................................................TACAAGATCCTGCAACGAAGGCGTTat............................. 27 at 1.00 0.00 - 1.00 - - - - - - - - - - - - -
.TGATAAACTAAGTAGAAGAGGCAATAG.............................................................................................................................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -
...............................................................TTCTAGCCCCGAGCAGTTACATCCTTG................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - -
................................................................................................................................................................ACAAAGAGATAAAGGAATCTATAAATgt.............................................................. 28 gt 1.00 0.00 - - - - - - - - - 1.00 - - - - -
...........................................................................................................................................................................................TTGCATTTACAAGATCCTGCAACGAAGGC.................................. 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - -
............................................................................................................................................................................................................TGCAACGAAGGCGTTGTAAGTTACTCT................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -
..........AAGTAGAAGAGGCAATAGGTCCAT........................................................................................................................................................................................................................ 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - -
.................AGAGGCAATAGGTCCAT........................................................................................................................................................................................................................ 17 1 1.00 1.00 - - - 1.00 - - - - - - - - - - -
...................................................................................................................CATCGAGGAGAGAAATGCACACACctc............................................................................................................ 27 ctc 1.00 0.00 - - - - - - - - - - - 1.00 - - -
..................................................................................................................................................TCACTTACCCAGCTACAAAGAGATAAAG............................................................................ 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - -
.........................................................................................................................................................................................................TCCTGCAACGAAGGCGTTGTAggtt........................ 25 ggtt 1.00 0.00 - - - - - - 1.00 - - - - - - - -
................................................................................................................................................................................................TTTACAAGATCCTGCAACGAAGGCGTT............................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - -
...............................................................TTCTAGCCCCGAGCAGTTACATCCTT................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - -
....TAAACTAAGTAGAAGAGGCAATAGGTCCAT........................................................................................................................................................................................................................ 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - -
..................................................................TAGCCCCGAGCAGTTACATCCTTGGa.............................................................................................................................................................. 26 a 1.00 1.00 - - - - - - - - 1.00 - - - - - -
....................................................................................................................................................................................................CAAGATCCTGCAACGAAGGCGTTGTAAGT......................... 29 1 1.00 1.00 - - - - - - 1.00 - - - - - - - -
....TAAACTAAGTAGAAGAGGCAATAGGTC........................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -
............................................................................................................................................................................................TGCATTTACAAGATCCTGCAACGAAGGC.................................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - -

Antisense strand
TTGATAAACTAAGTAGAAGAGGCAATAGGTCCATTAATTAAAAAAAAAAAGTTTCAAAGTGCATTCTAGCCCCGAGCAGTTACATCCTTGGTCAATGTATAGTTCCTCACGTTTGCATCGAGGAGAGAAATGCACACACACACACATCACTTACCCAGCTACAAAGAGATAAAGGAATCTATAAATTTTGCATTTACAAGATCCTGCAACGAAGGCGTTGTAAGTTACTCTTTCTGGGCACCACAGGTTC
.................................................................................................................((((((.......))..))))................................((((......))))......................................................................
................................................................................................................113................................................................180....................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)