| Gene: Reep3 | ID: uc007flq.1_intron_6_0_chr10_66525820_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(28) TESTES |
| GGCCCATCGGCCGAAAAGATGGTGTCCTGGATGATCTCCCGAGCCGTGGTGTAAGTACGGGCGGGGAAGACGCTTGGGGCCCGGTTGCCGGAGCCAAGCTCACGGGCCGCGGCCTGCTCACCCGTGTCCCAGTCGCTGCGGGGCTCCGGGGCGGCGGCGGCGTTGGGAGCAGCAGGGCGCGGGCGAACGGACTGGCAGGCGGTGGGCTCTGCTCCGTGGAGCCGCTCCCCGGCGCGCGGCGGGCTCTGCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................GGGCTCCGGGGCGGCGG............................................................................................. | 17 | 2 | 24.00 | 24.00 | 9.00 | 6.00 | 5.00 | 1.00 | 1.00 | - | 0.50 | 1.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGg............................................................................................ | 18 | g | 22.50 | 24.00 | 11.00 | 6.00 | 1.00 | 2.00 | 2.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGgt........................................................................................... | 19 | gt | 18.00 | 24.00 | 7.00 | 2.50 | 1.00 | 3.50 | 1.50 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGgtc.......................................................................................... | 20 | gtc | 10.50 | 24.00 | 4.00 | - | - | 2.50 | 1.00 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | 0.50 | 0.50 |
| ..........................................................................................................................................................................................ACGGACTGGCAGGCGGTGGGCTC......................................... | 23 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AAAAGATGGTGTCCTGGATGATCTCCC.................................................................................................................................................................................................................. | 27 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCG.............................................................................................. | 16 | 3 | 4.00 | 4.00 | - | 0.67 | 2.67 | - | - | 0.33 | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGC............................................................................................... | 15 | 8 | 2.75 | 2.75 | - | - | 1.88 | - | - | - | 0.62 | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGgg........................................................................................... | 19 | gg | 2.50 | 24.00 | 1.50 | - | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GCTCCGGGGCGGCGG............................................................................................. | 15 | 4 | 2.25 | 2.25 | - | - | 1.00 | 0.75 | - | - | - | - | 0.25 | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................GCGGGGCTCCGGGGCGGCGG............................................................................................. | 20 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCCTGGATGATCTCCCGAGCCGTGGT........................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GGGGCTCCGGGGCGGCGG............................................................................................. | 18 | 2 | 1.50 | 1.50 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GGCTCCGGGGCGGCGG............................................................................................. | 16 | 3 | 1.33 | 1.33 | - | - | 0.33 | 0.67 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AAAAGATGGTGTCCTGGATGATCTCCCGt................................................................................................................................................................................................................ | 29 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................TGGTGTCCTGGATGATCTCCCGAGC.............................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGgtcc......................................................................................... | 21 | gtcc | 1.00 | 24.00 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ..............AAAGATGGTGTCCTGGATGATCTCCC.................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................GGGCGAACGGACTGGCAGGC.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................GCGGGGAAGACGCTTGG............................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............AAGATGGTGTCCTGGATGATCTCCC.................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AAAAGATGGTGTCCTGGATGATCTCC................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................GGCGCGCGGCGGGCTgag.. | 18 | gag | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CGAAAAGATGGTGTCCTGGATGAT....................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............AAAAGATGGTGTCCTGGATGATCTCCCG................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GGCTCCGGGGCGGCG.............................................................................................. | 15 | 5 | 0.80 | 0.80 | - | - | 0.80 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGa............................................................................................ | 18 | a | 0.50 | 24.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GGGGCTCCGGGGCGGCGGg............................................................................................ | 19 | g | 0.50 | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGat........................................................................................... | 19 | at | 0.50 | 24.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ............................................................................................................................................GGGCTCCGGGGCGGCGGgc........................................................................................... | 19 | gc | 0.50 | 24.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCCCATCGGCCGAAAAGATGGTGTCCTGGATGATCTCCCGAGCCGTGGTGTAAGTACGGGCGGGGAAGACGCTTGGGGCCCGGTTGCCGGAGCCAAGCTCACGGGCCGCGGCCTGCTCACCCGTGTCCCAGTCGCTGCGGGGCTCCGGGGCGGCGGCGGCGTTGGGAGCAGCAGGGCGCGGGCGAACGGACTGGCAGGCGGTGGGCTCTGCTCCGTGGAGCCGCTCCCCGGCGCGCGGCGGGCTCTGCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................GGCTCTGCTCCGTGagt................................ | 17 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................GCCTGCTCACCCGTGTCCCAGTCGCTGCGGG............................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................CCGGCGCGCGGCGGG....... | 15 | 4 | 0.25 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |