| Gene: Sirt1 | ID: uc007fke.1_intron_3_0_chr10_62787954_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(3) PIWI.mut |
(20) TESTES |
| AGATACCTTGGAGCAGGTTGCAGGAATCCAAAGGATCCTTCAGTGTCATGGTTAGTGACGTCACAGTGGCTCTCGTAGGGCGTTCAATAGGTAACCGGGCTTGGAAAGAAGCTGCTGTCTAGTGACGAGACTAAGCGTTATTTAGTAACCTTGAGTGGACAAAATTGAAAAGGACACAAACAAAGCTGAAGGCCTCAGATGTGGTGGGTATACTTTGATAACAAGTTCAAGGCTAGCCTTGACTAAACAA ................................................................................................................((.(((((.((((((........)))))).......((......)).............))))))).......((((.....)))).................................................... ...............................................................................................................112.....................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................GTCTAGTGACGAGACTAAGCGTTATTTAGTAACCTTGAGTGGACAAAATTGA.................................................................................. | 52 | 1 | 54.00 | 54.00 | 54.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TCTAGTGACGAGACTAAGCGTTATTTAGTAACCTTGAGTGGACAAAATTGAA................................................................................. | 52 | 1 | 29.00 | 29.00 | 29.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGCC........................................................ | 29 | 1 | 20.00 | 20.00 | - | 10.00 | - | 2.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGCCTC...................................................... | 31 | 1 | 7.00 | 7.00 | - | - | - | 1.00 | 1.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGC......................................................... | 28 | 1 | 5.00 | 5.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGCCT....................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTCTAGTGACGAGACTAAGCG................................................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................AAAGGACACAAACAAAGCTGAAGG.......................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................ATGTGGTGGGTATACTTTGATAACAA.......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................AAGGACACAAACAAAGCTGAAGGCCTCAGATGTGG.............................................. | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................TCTAGTGACGAGACTAAGCGTT............................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................CAAACAAAGCTGAAGGCCTC...................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTGAAAAGGACACAAACAAAGCTGAAGGCC........................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGCt........................................................ | 29 | t | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................TCTAGTGACGAGACTAAGCGTTATTTAGTA....................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................AGGACACAAACAAAGCTGAAGGCCTCA..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAAAAGGACACAAACAAAGCTGAAGGtct....................................................... | 30 | tct | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TTGAGTGGACAAAATTGAAAAGGACACA........................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGGGTATACTTTGATAACAAGTTCAAGG.................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTGAAAAGGACACAAACAAAGCTGAAG........................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GTCTAGTGACGAGACTAAGCGTTATTTA.......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGAGTGGACAAAATTGAAAAGGA............................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTGAAAAGGACACAAACAAAGCTGAAGGCCTC...................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................GGCTCTCGTAGGGCGTTCAATAGGTA............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................TGAGTGGACAAAATTGA.................................................................................. | 17 | 3 | 0.33 | 0.33 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGATACCTTGGAGCAGGTTGCAGGAATCCAAAGGATCCTTCAGTGTCATGGTTAGTGACGTCACAGTGGCTCTCGTAGGGCGTTCAATAGGTAACCGGGCTTGGAAAGAAGCTGCTGTCTAGTGACGAGACTAAGCGTTATTTAGTAACCTTGAGTGGACAAAATTGAAAAGGACACAAACAAAGCTGAAGGCCTCAGATGTGGTGGGTATACTTTGATAACAAGTTCAAGGCTAGCCTTGACTAAACAA ................................................................................................................((.(((((.((((((........)))))).......((......)).............))))))).......((((.....)))).................................................... ...............................................................................................................112.....................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ...................................TCCTTCAGTGTCATGGTTA.................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |