| Gene: Dna2l | ID: uc007fji.1_intron_12_0_chr10_62425254_f.3p | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(2) PIWI.ip |
(17) TESTES |
| CTGGAGTCACCAGTCTCTTGAGGGTTAGGTGCATCATCTCTGAATGAACACAGACCCGGCAGTCCTCTGTTGTATGTGTGTTGGGGGGCCGATTCTAGTCTCACTGAACGTTGTAAGTGTTTGAAAACTGTAAGCCTGTTAACAGTTGTCCGGTTTCAAAGTGATGATGTTTTCCCTGTTCCTCGGCCTCCCATTTCTAGGTGAGGATCCTCTCTGCCTGTGGGTTCAGCGTTCTGCTGACCAGCTACAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................AGTCTCACTGAACGT........................................................................................................................................... | 15 | 5 | 36.60 | 36.60 | 24.40 | 9.40 | - | - | - | 1.60 | - | - | - | - | - | - | - | 0.40 | 0.20 | 0.40 | 0.20 |
| .................................................................................................GTCTCACTGAACGTT.......................................................................................................................................... | 15 | 5 | 4.60 | 4.60 | - | 3.80 | - | - | - | 0.40 | - | - | - | - | - | - | - | 0.40 | - | - | - |
| ...........................................ATGAACACAGACCCGGCcgt........................................................................................................................................................................................... | 20 | cgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................CATCTCTGAATGAACACAGACCCGGCAa............................................................................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........AGTCTCTTGAGGGTTAGGTGCATCATCTaa................................................................................................................................................................................................................. | 30 | aa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................TTGAGGGTTAGGTGCATCATCTCTGAAagta.......................................................................................................................................................................................................... | 31 | agta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................TAGTCTCACTGAACGT........................................................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| CTGGAGTCACCAGTCTCTTGAGGGTTAGGTGCATCATCTCTGAATGAACACAGACCCGGCAGTCCTCTGTTGTATGTGTGTTGGGGGGCCGATTCTAGTCTCACTGAACGTTGTAAGTGTTTGAAAACTGTAAGCCTGTTAACAGTTGTCCGGTTTCAAAGTGATGATGTTTTCCCTGTTCCTCGGCCTCCCATTTCTAGGTGAGGATCCTCTCTGCCTGTGGGTTCAGCGTTCTGCTGACCAGCTACAC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................GGGTTAGGTGCATCATCTCTGAATGAACAatt........................................................................................................................................................................................................ | 32 | att | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........GTCTCTTGAGGGTTAGGTGCATCAaggt...................................................................................................................................................................................................................... | 28 | aggt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................GCGTTCTGCTGACCgata........ | 18 | gata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GGTTTCAAAGTGATtgcg..................................................................................... | 18 | tgcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................GGGTTAGGTGCATCATCTCTGAATGAacct........................................................................................................................................................................................................... | 30 | acct | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................GGGTTAGGTGCATCATCTCTGAAataa.............................................................................................................................................................................................................. | 27 | ataa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GGGTTAGGTGCATCATCTCTGAATGAACAact........................................................................................................................................................................................................ | 32 | act | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GTGCATCATCTCTGAATGAtctc........................................................................................................................................................................................................... | 23 | tctc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GTCTCTTGAGGGTTAGGTGCATCATCTCagt.................................................................................................................................................................................................................. | 31 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............CTCTTGAGGGTTAGGTGCATCATCTCTGAtt............................................................................................................................................................................................................... | 31 | tt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CTCTTGAGGGTTAGGTGCATCATCTCTGAAttt.............................................................................................................................................................................................................. | 33 | ttt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CTCTTGAGGGTTAGGTGCATCATCTCTGAAtaa.............................................................................................................................................................................................................. | 33 | taa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............CTTGAGGGTTAGGTGCATCATCTCTcata................................................................................................................................................................................................................. | 29 | cata | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |