| Gene: Col13a1 | ID: uc007fgq.1_intron_7_0_chr10_61325837_r.5p | SPECIES: mm9 |
|
|
|
(1) OTHER.mut |
(10) TESTES |
| TTCCTGGACAAACAGGCCCACCCGGACCTCCAGGGACTCCAGGCCAAAGGGTAAAGCTTGTCCCAATGGAGGGTGGTAACTGGGAAGGTGAAGGGGGCTATGGGGTGTGGGCATGGACAGGGTAAGGTGTTTAAGATGCTGAGAGGATGATGCATTCTGAGCACATAACCCCAGGGCTCCCCATATTCTCTGACCCCCTTCATCATCTCAGGACTGTCACATTTGCCTGGCAGCTATTCCTCTCTGTACC ................................................................................................(((.((..(((....)))...)).)))...(((((((..((((............))))..)))))))...................................................................................... ......................................................................................87.............................................................................166.................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................GAGGATGATGCATTCTGAGC........................................................................................ | 20 | 1 | 39.00 | 39.00 | 14.00 | 9.00 | 10.00 | 4.00 | 2.00 | - | - | - | - | - |
| ...........................................................................................AGGGGGCTATGGGGcgga............................................................................................................................................. | 18 | cgga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................AGGATGATGCATTCTGAGC........................................................................................ | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| TTCCTGGACAAACAGGCCCACCCGGACCTCCAGGGACTCCAGGCCAAAGGGTAAAGCTTGTCCCAATGGAGGGTGGTAACTGGGAAGGTGAAGGGGGCTATGGGGTGTGGGCATGGACAGGGTAAGGTGTTTAAGATGCTGAGAGGATGATGCATTCTGAGCACATAACCCCAGGGCTCCCCATATTCTCTGACCCCCTTCATCATCTCAGGACTGTCACATTTGCCTGGCAGCTATTCCTCTCTGTACC ................................................................................................(((.((..(((....)))...)).)))...(((((((..((((............))))..)))))))...................................................................................... ......................................................................................87.............................................................................166.................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................CCCCTTCATCATCTCAGGACTGTCACA............................. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................TGGAGGGTGGTAACattc.......................................................................................................................................................................... | 18 | attc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................TGGAGGGTGGTAACaacc.......................................................................................................................................................................... | 18 | aacc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................TGGAGGGTGGTAACagta.......................................................................................................................................................................... | 18 | agta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................................GTCACATTTGCCTGGCAGCTATTCCTC........ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................CTGACCCCCTTCATCATCTCAGGA..................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................CCCCCTTCATCATCTCAGGACTGTCA............................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |