| Gene: Tysnd1 | ID: uc007fgh.1_intron_1_0_chr10_61161177_f.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(18) TESTES |
| GGAGCTGAATGGTGTTCCCACGCCTGTCCCTGCTGGGCACTTCCATGAAGGTAGAGGACAAAGGGACTGAAGTGATGGTGGTGTGTGTGTGTGTGTGTGTGAGAGAGAGACCTGATAGCCAGCAGGCAGAAATGGGCAAAGCCTGCCAAGCAAGAGAGTTGGGAGCTTAGGTAGGGTTTGGGGCTTCTTAGACTTCCCTGTATATCAGACGTTGACACCTCAAGTGCTGAGCCAAGTGGATACCTTATTG .............................................................................................................((((((...((.((((((.............))))))..(((......))).))...)))))).............................................................................. .................................................................................................98..........................................................................174.......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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| ...............................................................................................................................................TGCCAAGCAAGAGAGTTGGGAGCTTAG................................................................................ | 27 | 1 | 7.00 | 7.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................GAGAGAGACCTGATAGCCAGCAGGCAG......................................................................................................................... | 27 | 1 | 7.00 | 7.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TGCTGGGCACTTCCATGAAGGTAGAGGAC............................................................................................................................................................................................... | 29 | 1 | 4.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TGGGCACTTCCATGAAGGTAGAGGACA.............................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGTGAGAGAGAGACCTGATAGCCAGC............................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................TGAAGGTAGAGGACAAAGGGACTG..................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................GAGAGAGACCTGATAGCCAGCAGGCAGA........................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GAGAGAGAGACCTGATAGCCAGCAGGCAG......................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................CAGACGTTGACACCTCAAGTGCTGAGCC................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAAGGTAGAGGACAAAGGGACTGAAGT................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TTCCATGAAGGTAGAGGACAAAGGGAC....................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................AGGGACTGAAGTGATG............................................................................................................................................................................. | 16 | 5 | 1.60 | 1.60 | - | - | - | - | - | - | - | - | - | 1.60 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TGCTGAGCCAAGTGGATACCTTATTG | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TGCCAAGCAAGAGAGTTGGGAGCTTA................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGAGAGAGAGACCTGATAGCCAGCAGGCAG......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................AGAGAGAGACCTGATAGCCAGCAGGCAGt........................................................................................................................ | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................GTGTGTGAGAGAGAGACCTGATAGCCAGC............................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GAGAGAGAGACCTGATAGCCAGCAGGCAt......................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAGAGGACAAAGGGACTGAAGTGATGGTG.......................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................AGAGAGTTGGGAGCTTAGGTAGGGTT........................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TGTATATCAGACGTTGACACCTCAAG.......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGTGAGAGAGAGACCTGATAGCCAGCAGt............................................................................................................................ | 29 | t | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AGCAAGAGAGTTGGGAGCTTAGGTAG............................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................AGAGACCTGATAGCCAGCAGGCAGAAATGGGC................................................................................................................. | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCAAGTGCTGAGCCAAGTGGATACCTTA... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................GTGTGTGAGAGAGAGACCTGATAGC................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TGCTGGGCACTTCCATGAAGGTAGAGG................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGTGTGTGTGAGAGAGAGACCTGATAGC................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TATCAGACGTTGACACCTCAAGTGC....................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................AGGACAAAGGGACTGAAGTGATGGTG.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................................................................TATCAGACGTTGACACCTCAAGTGCT...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CAAGCAAGAGAGTTGGGAGCTTAGGTAG............................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGTGAGAGAGAGACCTGATAGCCAGCAG............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGAGGACAAAGGGACTGAAGTGATGt............................................................................................................................................................................ | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................AGAGAGAGACCTGATAGCCAGCAGGCcg......................................................................................................................... | 28 | cg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................ACAAAGGGACTGAAGTGATGGTGGT........................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGTGTGTGTGAGAGAGAGACCTG........................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................GAGACCTGATAGCCAGCAG............................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGAAGGTAGAGGACAAAGGGACTGAAG.................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TGTATATCAGACGTTGACACCTCAAGT......................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GTGTGTGTGAGAGAGAGACCTGATAGC................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GAGAGAGAGACCTGATAGCCAGCAGGCAGAAATGG................................................................................................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................TGTGTGTGAGAGAGAGACCTGATAGC................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................AGAGACCTGATAGCCAGCAGGCAGAAATGGG.................................................................................................................. | 31 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GAGGACAAAGGGACTGAAGTGATGGT........................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................GAGAGAGACCTGATAGCCAGCAGGCAGAA....................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| GGAGCTGAATGGTGTTCCCACGCCTGTCCCTGCTGGGCACTTCCATGAAGGTAGAGGACAAAGGGACTGAAGTGATGGTGGTGTGTGTGTGTGTGTGTGTGAGAGAGAGACCTGATAGCCAGCAGGCAGAAATGGGCAAAGCCTGCCAAGCAAGAGAGTTGGGAGCTTAGGTAGGGTTTGGGGCTTCTTAGACTTCCCTGTATATCAGACGTTGACACCTCAAGTGCTGAGCCAAGTGGATACCTTATTG .............................................................................................................((((((...((.((((((.............))))))..(((......))).))...)))))).............................................................................. .................................................................................................98..........................................................................174.......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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