| Gene: Ranbp2 | ID: uc007fdd.1_intron_13_0_chr10_57928330_f | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(15) TESTES |
| CTGCTTTTGAATCTATTAAAAATGTAGTTTCTTATTGGAATCTTGCACTGGTAAGTGAAATAAGAATTGAATTGAGTTTTGTTTGTTTGTTTGCTTGCTTGCTTTGAAAAATCTAATTGTATTTTGTGTAGATTTTCCACAGGAAAGCAGAAGACATTGAAAATGATGCCTTGTCTCCTGA ..........................................................................(((...((..((......))..))..))).............................................................................. ..........................................................................75......................................................131................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
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| ............................................................................................................AAATCTAATTGTATTTTGTGTAG.................................................. | 23 | 1 | 19.00 | 19.00 | 12.00 | 3.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - |
| ...........................................................................................................AAAATCTAATTGTATTTTGTGTAG.................................................. | 24 | 1 | 9.00 | 9.00 | 5.00 | 1.00 | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................CACTGGTAAGTGAAATAAGAATTGAATTGAGTTTTGTTTGTTTGTTTGCTTG.................................................................................... | 52 | 1 | 4.00 | 4.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATTTTGTGTAGATTTTCCACAGGAAAGCAG............................... | 30 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................AAATCTAATTGTATTTTGTGTAGAa................................................ | 25 | a | 3.00 | 0.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................CTAATTGTATTTTGTGTAG.................................................. | 19 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGAAATAAGAATTGAATTtagt........................................................................................................ | 27 | tagt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................AAAATCTAATTGTATTTTGTGTAGA................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................AAAATCTAATTGTATTTTGTttag.................................................. | 24 | ttag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................TATTGGAATCTTGtttt.................................................................................................................................... | 17 | tttt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GCTTTGAAAAATCTAATTGTATTTTGTGTAG.................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................TGTTTGTTTGTTTGCTTGCTTGCga............................................................................. | 25 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................TGCTTTGAAAAATCTAATTGTATTTTGTGTAG.................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................TTTGAAAAATCTAATTGTATTTTGTGTAGA................................................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................AAAATCTAATTGTATTTTGTGTAGAa................................................ | 26 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................AAAATCTAATTGTATTTTGTGTA................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TTTTGTGTAGATTTTCCAC......................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............ATTAAAAATGTAGTTggc..................................................................................................................................................... | 18 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................ATGTAGTTTCTTATTGG............................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| CTGCTTTTGAATCTATTAAAAATGTAGTTTCTTATTGGAATCTTGCACTGGTAAGTGAAATAAGAATTGAATTGAGTTTTGTTTGTTTGTTTGCTTGCTTGCTTTGAAAAATCTAATTGTATTTTGTGTAGATTTTCCACAGGAAAGCAGAAGACATTGAAAATGATGCCTTGTCTCCTGA ..........................................................................(((...((..((......))..))..))).............................................................................. ..........................................................................75......................................................131................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
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