| Gene: Degs1 | ID: uc007dxw.1_intron_1_0_chr1_184209850_r.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(3) PIWI.ip |
(18) TESTES |
| ATGGGTCTACACGGACCAGCCCCACGCCGCCCGGCGCAAGGAGATCTTAGGTGAAGACTGGACCCCGTTATGTGCGCGTGGCCGCGTGCGGGCCCTGAGCGGCCTCCCGTGCGCGCCGTGCGAGCGCGGCCTCCGCGGCCCCTTCCAGCCGCTCCGCTGCTTGGCCGCCGGCGCGGGCTCCGGGCGGGCGGGAGAACCGAGGGATGAGGGATCAGCGCGCCGCCGCTCGCTGCTAGCCCTTCGATGGTCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................CGGCGCGGGCTCCGGG.................................................................. | 16 | 5 | 13.40 | 13.40 | 4.20 | 4.40 | - | 0.20 | 2.60 | - | 0.40 | 0.60 | 0.40 | 0.40 | - | - | - | - | - | - | - | 0.20 |
| .......................................................................................................................................................................CCGGCGCGGGCTCCGGGgcgg.............................................................. | 21 | gcgg | 3.00 | 0.00 | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGG................................................................... | 15 | 5 | 3.00 | 3.00 | 0.80 | 0.80 | - | - | - | - | 1.40 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................GGCGCGGGCTCCGGG.................................................................. | 15 | 7 | 2.86 | 2.86 | 0.71 | 0.71 | - | - | 1.14 | - | - | 0.14 | - | - | - | - | - | - | - | - | - | 0.14 |
| .......................................GGAGATCTTAGGTGAAGACTGGACCC......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................CCGGCGCGGGCTCCGGGgcg............................................................... | 20 | gcg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTGAAGACTGGACCCCGTTATGT................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................GGCTCCGGGCGGGCGGGAGAA...................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GCGCGCCGCCGCTCGacg.................. | 18 | acg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGGGCcg............................................................... | 19 | cg | 1.00 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 |
| .......................................................................................................................................................................CCGGCGCGGGCTCCGGGg................................................................. | 18 | g | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................CGCGGGCTCCGGGtcg............................................................... | 16 | tcg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................CGCGGCCTCCGCGGacct............................................................................................................ | 18 | acct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......TACACGGACCAGCCCCACGCCGCCCGGCGC..................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GATCAGCGCGCggta.......................... | 15 | ggta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......CTACACGGACCAGCCCCACGCCGCCCGG........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......CTACACGGACCAGCCCCACGCCGCCCGGCGC..................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................................CCGCTCGCTGCTAGCCCTTCGA...... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................AGGGATGAGGGATCAaaa................................. | 18 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................AAGGAGATCTTAGGTGAAGACTGGACCC......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGGGC................................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGGGCcgg.............................................................. | 20 | cgg | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGGGCcga.............................................................. | 20 | cga | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CGGCGCGGGCTCCGGGacgg.............................................................. | 20 | acgg | 0.40 | 13.40 | 0.40 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATGGGTCTACACGGACCAGCCCCACGCCGCCCGGCGCAAGGAGATCTTAGGTGAAGACTGGACCCCGTTATGTGCGCGTGGCCGCGTGCGGGCCCTGAGCGGCCTCCCGTGCGCGCCGTGCGAGCGCGGCCTCCGCGGCCCCTTCCAGCCGCTCCGCTGCTTGGCCGCCGGCGCGGGCTCCGGGCGGGCGGGAGAACCGAGGGATGAGGGATCAGCGCGCCGCCGCTCGCTGCTAGCCCTTCGATGGTCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................GCCGCTCGCTGCTAGCCCTTCGATGGTCA | 29 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................GCTCGCTGCTAGCCCTTCGATGGTCA | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....TCTACACGGACCAGCCCCACGCC.............................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................GGCCTCCGCGGCCCCTTCCA....................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CCGCTCGCTGCTAGCCCTTCGATGGTCA | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................CCCCACGCCGCCCGG........................................................................................................................................................................................................................ | 15 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |