| Gene: Parp1 | ID: uc007dwi.1_intron_7_0_chr1_182516122_f.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(17) TESTES |
| TGCCCTCTGTTTCCCCGCTGCCTGTTGGCGCCTGTCTTCATAAAGTTTTCCCAAAGAAAAGAGTGAAGACCAAGGCTGGCCAGGCTCTGTGGCTTCTATGGTTTCTCCTAAAGCCAGCTGTTTTGTCTTGCCTCCATTCATCCTTTCCTGGGGTTAGAGTTGAGTGGTCGTAGCCTGTTGCTTCTGATCTCTTACCCCAGACAAGCCCCTGTCTAACATGAAGATCCTGACTCTTGGGAAGCTCTCCCAG ..............................................................................................................................................(((..(((((((.((((.....(((..((((....))))..)))..)))).)))))))..)))............................................. ............................................................................................................................................141................................................................208........................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................TCCTGGGGTTAGAGTTGAGTGG................................................................................... | 22 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTCCTGGGGTTAGAGTTGAGTGG................................................................................... | 23 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGAatt.............................................. | 22 | att | 2.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TCCTGGGGTTAGAGTTGAGTGGT.................................................................................. | 23 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................TTCCTGGGGTTAGAGTTGAGTGGT.................................................................................. | 24 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGAaa............................................... | 21 | aa | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGttt............................................... | 21 | ttt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CCTGGGGTTAGAGTTGAGTGGaa................................................................................. | 23 | aa | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGA................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTCCTGGGGTTAGAGTTGAGTGGTtt................................................................................ | 26 | tt | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................TTTCCTGGGGTTAGAGTTGAGTGG................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGAAGATCCTGACTCTTGGGAAGCTCa..... | 27 | a | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTCCTGGGGTTAGAGTTGAGTGt................................................................................... | 23 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TCGTAGCCTGTTGCTTCTGATCTCTTACCCCAG.................................................. | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................AGAGTGAAGACCAAGGCTGG........................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................................................................................TCTAACATGAAGATCCTGACTCTTGGGAAGC........ | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................AACATGAAGATCCTGACTCTTG.............. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGAgt............................................... | 21 | gt | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGAaaa.............................................. | 22 | aaa | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGACA............................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................................TGAAGATCCTGACTCTTGGGAAGCTC...... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TCTGATCTCTTACCCCAGAttt.............................................. | 22 | ttt | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GAAGATCCTGACTCTTGGGAAG......... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CATGAAGATCCTGACTCTTG.............. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| TGCCCTCTGTTTCCCCGCTGCCTGTTGGCGCCTGTCTTCATAAAGTTTTCCCAAAGAAAAGAGTGAAGACCAAGGCTGGCCAGGCTCTGTGGCTTCTATGGTTTCTCCTAAAGCCAGCTGTTTTGTCTTGCCTCCATTCATCCTTTCCTGGGGTTAGAGTTGAGTGGTCGTAGCCTGTTGCTTCTGATCTCTTACCCCAGACAAGCCCCTGTCTAACATGAAGATCCTGACTCTTGGGAAGCTCTCCCAG ..............................................................................................................................................(((..(((((((.((((.....(((..((((....))))..)))..)))).)))))))..)))............................................. ............................................................................................................................................141................................................................208........................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................CCTCCATTCATCCTttgt.......................................................................................................... | 18 | ttgt | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |