| Gene: Tagln2 | ID: uc007dqp.1_intron_0_0_chr1_174430464_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(12) TESTES |
| CCAGTGGGTCCCAGGCGTCATTCTAGACACAGGACCATTCATTCAGACGAAATGTAGTATCTGTGTGGCTTCCTACTGGCCAGAGTCCAGAGCCCTGCTGCGCTAGCTCCTGGCCACGAGTCCCTCCCCTGTCTTCATAGGGACCCTATGCATTGGATTGTAGAATGTTGAGCGTGGGCCTGGTTATGTCCTCTCCACAGCTCTTTGCCATCACCACAGCTGCTCAGAATGGCCAACAGGGGACCTTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................TATGCATTGGATTGTAGAATGTTGAGC............................................................................. | 27 | 1 | 7.00 | 7.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................TAGGGACCCTATGCATTGGATTGTAGA...................................................................................... | 27 | 1 | 4.00 | 4.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................TAGTATCTGTGTGGCTTCCTACTG............................................................................................................................................................................ | 24 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| .......................TAGACACAGGACCATTCATTCAGACG......................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TTGGATTGTAGAATGTTGAGCGTGG......................................................................... | 25 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................TCAGACGAAATGTAGTATCTGTGTGGC..................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGATTGTAGAATGTTGAGCGTGGG........................................................................ | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................TAGGGACCCTATGCATTGGATTGTAGAA..................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGCATTGGATTGTAGAATGTTGAGCGTGa......................................................................... | 29 | a | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .......................TAGACACAGGACCATTCATTCAGACGA........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................TAGTATCTGTGTGGCTTCCTACTGGC.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TTGGATTGTAGAATGTTGAGgggc.......................................................................... | 24 | gggc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................AGCTGCTCAGAATGGCCAACAGGGGA....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................TCACCACAGCTGCTCAGAATGGCCAACA............ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................AGACACAGGACCATTCATTCAGACGAAATc.................................................................................................................................................................................................... | 30 | c | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................TAGGGACCCTATGCATTGGATTGTAG....................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................ACGAAATGTAGTATCTGTGTGGCTTCCT................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................CACAGCTGCTCAGAATGG.................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TTCAGACGAAATGTAGTATCTGTGTGGC..................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCACCACAGCTGCTCAGAATGGCCAAC............. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGCATTGGATTGTAGAATGTTGAGCG............................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGCATTGGATTGTAGAATGTTGAGC............................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCACCACAGCTGCTCAGAATGGCCAACAG........... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTGCCATCACCACAGCTGCTCAGAATG................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................TCTTTGCCATCACCACAGCTGCTCAG....................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................GCATTGGATTGTAGAATGTTGAGC............................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CCAGTGGGTCCCAGGCGTCATTCTAGACACAGGACCATTCATTCAGACGAAATGTAGTATCTGTGTGGCTTCCTACTGGCCAGAGTCCAGAGCCCTGCTGCGCTAGCTCCTGGCCACGAGTCCCTCCCCTGTCTTCATAGGGACCCTATGCATTGGATTGTAGAATGTTGAGCGTGGGCCTGGTTATGTCCTCTCCACAGCTCTTTGCCATCACCACAGCTGCTCAGAATGGCCAACAGGGGACCTTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................TGCCATCACCACAGCTGCTCAGAAT.................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................CAGAGTCCAGAGCCCTaatc.......................................................................................................................................................... | 20 | aatc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................TAGACACAGGACCATTtg................................................................................................................................................................................................................... | 18 | tg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............GGCGTCATTCTAGACACAGGACCATTCA................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................GAGTCCCTCCCCTGTaaa...................................................................................................................... | 18 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................................GCTCTTTGCCATCACCACAGCTGCTCA........................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................CCACGAGTCCCTCCCCTGTCTTCA................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |