| Gene: Igsf9 | ID: uc007dqm.1_intron_1_0_chr1_174414678_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| GTGTCTCCGTCTGACCGTCCTCAGCCTGATCATCAGCCAGGGGGCTGACGGTGAGCCAGACCCAAGGGAACCAACAACTCTGTGTTACCCTGGGATATTACTGTTTCGCAAGGGGTTATCTGTGAGAATTTGAGTGTAGGAGAGGGCTAGGGCTGGCTCAGAGAGGTTGGGGTTTGCCCCAATCGTGCAAAGTCTTAAGGAAACTTGAGAGATGTTGATGACGCCTTCCCCCTCCCGCATCTCATTTTGATCCCTTGCTGTTCCCTCGTGCTACCCACCTCATAGGTCGAAGAAAGCCTGAGGTGGTCTCTGTGGTGGGCCGGGCTGGGGAGAGT ....................................................................................................................((((..............((((.(((..(((....)))..))).....((((((((....)))))))).))))...(((((((....)))))))))))......................................................................................................................... .................................................................................................................114..................................................................................................215...................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................TGTGAGAATTTGAGTGTAGGAGAGGG............................................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TCTGTGAGAATTTGAGTGTAGGAGAGG.............................................................................................................................................................................................. | 27 | 1 | 4.00 | 4.00 | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGAGAATTTGAGTGTAGGAGAGGGCT........................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................TAGGTCGAAGAAAGCCTGAGGTGGTCTC......................... | 28 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................TAGGTCGAAGAAAGCCTGAGGTGGTCTCT........................ | 29 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................TGCAAAGTCTTAAGGAAACTTGAGAG............................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................TAGGTCGAAGAAAGCCTGAGGTGGTC........................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGAGAATTTGAGTGTAGGAGAGGGC............................................................................................................................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TAGGGCTGGCTCAGAGAGGTTGGGGT.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTAAGGAAACTTGAGAGATGTTGATG................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGAGAATTTGAGTGTAGGAGAGGGCTA.......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................TTTGAGTGTAGGAGAGGGCTAGGGt...................................................................................................................................................................................... | 25 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGTGAGAATTTGAGTGTAGGAGAG............................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................TCCCTTGCTGTTCCCTCGTGCTACCCACC........................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TTTGAGTGTAGGAGAGGGCTAGG........................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TATCTGTGAGAATTTGAGTGTAGGAGAGG.............................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................TGAGAATTTGAGTGTAGttg................................................................................................................................................................................................. | 20 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGTGAGAATTTGAGTGTAGGAGA................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................CAAAGTCTTAAGGAAACTTGAGAGc........................................................................................................................... | 25 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................TGAGAATTTGAGTGTAGGAGAGGG............................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................CTCTGTGGTGGGCCGGtg.......... | 18 | tg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................TGAGAGATGTTGATGACGCCTTCCCCC....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TCTGACCGTCCTCAGCCTGATC................................................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TAAGGAAACTTGAGAGATGTTGATGAC................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................AGGGGTTATCTGTGAttga.............................................................................................................................................................................................................. | 19 | ttga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................CGAAGAAAGCCTGAGGTGGTCTCTGg...................... | 26 | g | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTGTCTCCGTCTGACCGTCCTCAGCCTGATCATCAGCCAGGGGGCTGACGGTGAGCCAGACCCAAGGGAACCAACAACTCTGTGTTACCCTGGGATATTACTGTTTCGCAAGGGGTTATCTGTGAGAATTTGAGTGTAGGAGAGGGCTAGGGCTGGCTCAGAGAGGTTGGGGTTTGCCCCAATCGTGCAAAGTCTTAAGGAAACTTGAGAGATGTTGATGACGCCTTCCCCCTCCCGCATCTCATTTTGATCCCTTGCTGTTCCCTCGTGCTACCCACCTCATAGGTCGAAGAAAGCCTGAGGTGGTCTCTGTGGTGGGCCGGGCTGGGGAGAGT ....................................................................................................................((((..............((((.(((..(((....)))..))).....((((((((....)))))))).))))...(((((((....)))))))))))......................................................................................................................... .................................................................................................................114..................................................................................................215...................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................GGGTTTGCCCCAATtagc........................................................................................................................................................ | 18 | tagc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................CGTGCAAAGTCTTAA......................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |