| Gene: Atp1a2 | ID: uc007dqc.1_intron_8_0_chr1_174210218_r | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(15) TESTES |
| GAAGACATTGCAGCCAGGCTCAACATTCCTGTGAGTCAAGTCAATCCCAGGTGAGGCTGTTACAAAGACCGCATTGCTGGCCAACACATCATCTCCCAGAAAGGCCCTGAGTGTCCCTTGGGAATATCTGGACAGCATCCCCGGGACCCTTAGACTAAAGTTTTTCCTTTGACAGCCCAATGGCTGGTCCCTCAGACAAGCTTGTGTTCAGGCTGTGCCACCGATGAGCTGTGTCACCTTGGAAACATCTTGCAGCCCTGATCTTTCATTTTCTCAGTTATGAAATTCAGATGCTGTCCACACTGCAGTTGCTATAGGGATAGAATCTGCCTAGCAAATGGTACTTCTGCTTGCATGGGAAGGATGTTATGTCTCCTCTGAGAGAAATAGCAGGACTCGGCTTCACAAAAGGGAGCACAGAAGCAATAGTAGAGTCCCACCTCCCAGAGGAACTAAGGCACACAGCGGGTGGGCGGGGAAGGGCAGCAAGACCGGCATGAGCATAGATGCTGTCTCTGCTCCTACCCTCCAGAGAAGCCAAGGCGTGTGTAGTGCACGGCTCAGACCTGAAGGACATGACGT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((((....)))......((.....)).)))))).((((.(((((((..(((.((((((........))))))))))))).))).))))...................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................433................................................................................................532................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTCTGCTCCTACCCTCCAGt................................................. | 24 | t | 11.00 | 1.00 | - | 6.00 | - | - | - | 2.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTCTGCTCCTACCCTCCAGA................................................. | 24 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTCTGCTCCTACCCTCCAGt................................................. | 23 | t | 8.00 | 0.00 | - | - | 3.00 | 2.00 | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................TCACCTTGGAAACATatc........................................................................................................................................................................................................................................................................................................................................... | 18 | atc | 3.00 | 0.00 | - | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGAAGGGCAGCAAGACCGGCA..................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGTGGGCGGGGggta.................................................................................................... | 18 | ggta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................GCCCTGAGTGTCCCTTGaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTCTGCTCCTACCCTCCAGAt................................................ | 24 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGTGCACGGCTCAGACCTGAAGGAC....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTCTGCTCCTACCCTCCAGA................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .AAGACATTGCAGCCAGcgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTCTGCTCCTACCCTCCAta................................................. | 24 | ta | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGAAGGGCAGCAAGACCGGCt..................................................................................... | 24 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTCTGCTCCTACCCTCCAG.................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGCACGGCTCAGA................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GAAGACATTGCAGCCAGGCTCAACATTCCTGTGAGTCAAGTCAATCCCAGGTGAGGCTGTTACAAAGACCGCATTGCTGGCCAACACATCATCTCCCAGAAAGGCCCTGAGTGTCCCTTGGGAATATCTGGACAGCATCCCCGGGACCCTTAGACTAAAGTTTTTCCTTTGACAGCCCAATGGCTGGTCCCTCAGACAAGCTTGTGTTCAGGCTGTGCCACCGATGAGCTGTGTCACCTTGGAAACATCTTGCAGCCCTGATCTTTCATTTTCTCAGTTATGAAATTCAGATGCTGTCCACACTGCAGTTGCTATAGGGATAGAATCTGCCTAGCAAATGGTACTTCTGCTTGCATGGGAAGGATGTTATGTCTCCTCTGAGAGAAATAGCAGGACTCGGCTTCACAAAAGGGAGCACAGAAGCAATAGTAGAGTCCCACCTCCCAGAGGAACTAAGGCACACAGCGGGTGGGCGGGGAAGGGCAGCAAGACCGGCATGAGCATAGATGCTGTCTCTGCTCCTACCCTCCAGAGAAGCCAAGGCGTGTGTAGTGCACGGCTCAGACCTGAAGGACATGACGT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((((....)))......((.....)).)))))).((((.(((((((..(((.((((((........))))))))))))).))).))))...................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................433................................................................................................532................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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